RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 OR5K1Q8NHB7 308 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 RPS4Y2Q8TD47 263 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 ZNRF4Q8WWF5 429 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 FAM162AQ96A26 154 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 C19orf12Q9NSK7 152 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 MPC1Q9Y5U8 109 aa13.85□□□□□ -0.19
VIM-204ENST00000478746 IGKV1D-17A0A075B6S4 117 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 hCG_1809904A0A1W2PP81 198 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 A0A1W2PR64 198 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 A0A1W2PRV1 198 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 FAM90A8PA6NJQ4 464 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 ZNF593O00488 134 aaPredicted RBP13.84□□□□□ -0.19
VIM-204ENST00000478746 DIRAS1O95057 198 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 PSG2P11465 335 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 GLRA1P23415 457 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 ENTPD1P49961 510 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 CAPZA1P52907 286 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 BLCAPP62952 87 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 GRB2P62993 217 aaKnown RBP13.84□□□□□ -0.19
VIM-204ENST00000478746 KLHL12Q53G59 568 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 FAM76BQ5HYJ3 339 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 Q6ZS46 218 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 DYNAPQ8N1N2 210 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 FTMTQ8N4E7 242 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 OR5P3Q8WZ94 311 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 RNF170Q96K19 258 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
VIM-204ENST00000478746 FUZQ9BT04 418 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 COMMD3-BMI1R4GMX3 469 aa13.84□□□□□ -0.19
VIM-204ENST00000478746 ZNF850A8MQ14 1090 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 NME4O00746 187 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 SLC22A2O15244 555 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 RHBDL1O75783 438 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 ALDOBP05062 364 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 NCK1P16333 377 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 HSD11B1P28845 292 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 HOXD3P31249 432 aaPredicted RBP13.83□□□□□ -0.2
VIM-204ENST00000478746 FMO3P31513 532 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 SLC25A1P53007 311 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 ERVFRD-1P60508 538 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 RPL31P62899 125 aaKnown RBP13.83□□□□□ -0.2
VIM-204ENST00000478746 EGFEM1PQ0D2K5 195 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 PRDX4Q13162 271 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 GFOD2Q3B7J2 385 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 TMEM200BQ69YZ2 307 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 FAM57BQ71RH2 274 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 C11orf42Q8N5U0 333 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 OR52H1Q8NGJ2 320 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 RP9Q8TA86 221 aaKnown RBP13.83□□□□□ -0.2
VIM-204ENST00000478746 C7orf34Q96L11 122 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 DHRS1Q96LJ7 313 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 HOPXQ9BPY8 73 aaPredicted RBP13.83□□□□□ -0.2
VIM-204ENST00000478746 MUC13Q9H3R2 512 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 ABCB9Q9NP78 766 aa13.83□□□□□ -0.2
VIM-204ENST00000478746 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 SYNGR1O43759 233 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 APOC1P02654 83 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 SMIM11AP58511 58 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 CCDC121Q6ZUS5 278 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 CENPVQ7Z7K6 275 aaPredicted RBP13.82□□□□□ -0.2
VIM-204ENST00000478746 TIGD4Q8IY51 512 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 MALSU1Q96EH3 234 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 SDSLQ96GA7 329 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 OR10A2Q9H208 303 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 YY1AP1Q9H869 796 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 BRD7Q9NPI1 651 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 CD300AQ9UGN4 299 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 ZNF222Q9UK12 451 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 LRP12Q9Y561 859 aa13.82□□□□□ -0.2
VIM-204ENST00000478746 TSSC4Q9Y5U2 329 aaPredicted RBP13.82□□□□□ -0.2
VIM-204ENST00000478746 DHRS12A0PJE2 317 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 F2RL2O00254 374 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 NDUFAB1O14561 156 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 GADD45GO95257 159 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 CLIC3O95833 236 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 DCTDP32321 178 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 SSX2Q16385 188 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 TEX30Q5JUR7 227 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 PRSS45Q7RTY3 260 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 FAM86B1Q8N7N1 296 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 PIGCQ92535 297 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 DPF1Q92782 380 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 FOXRED1Q96CU9 486 aaPredicted RBP13.81□□□□□ -0.2
VIM-204ENST00000478746 HIST1H2AAQ96QV6 131 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
VIM-204ENST00000478746 INPP5EQ9NRR6 644 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 DNAJC27Q9NZQ0 273 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 ZNF319Q9P2F9 582 aa13.81□□□□□ -0.2
VIM-204ENST00000478746 SNX3O60493 162 aa13.8□□□□□ -0.2
VIM-204ENST00000478746 CST4P01036 141 aa13.8□□□□□ -0.2
VIM-204ENST00000478746 ARG1P05089 322 aa13.8□□□□□ -0.2
VIM-204ENST00000478746 NHLRC4P0CG21 123 aaPredicted RBP13.8□□□□□ -0.2
VIM-204ENST00000478746 COX4I1P13073 169 aa13.8□□□□□ -0.2
VIM-204ENST00000478746 IFNGR2P38484 337 aa13.8□□□□□ -0.2
VIM-204ENST00000478746 ZNF121P58317 390 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms