RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 SYT4Q9H2B2 425 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 POLE4Q9NR33 117 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 DDX28Q9NUL7 540 aaKnown RBP5.31□□□□□ -1.56
HOXB3-209ENST00000478644 ARMC1Q9NVT9 282 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 CHCHD3Q9NX63 227 aaKnown RBP5.31□□□□□ -1.56
HOXB3-209ENST00000478644 TREM2Q9NZC2 230 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 MIOXQ9UGB7 285 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 BAIAP2Q9UQB8 552 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 WIPI2Q9Y4P8 454 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 NPTNQ9Y639 398 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 U3KQV3 271 aa5.31□□□□□ -1.56
HOXB3-209ENST00000478644 CUBNO60494 3623 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 IGLV1-36A0A0B4J1U3 117 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 A0A1B0GUS0 222 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR6C6A6NF89 314 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 A8MXK9 166 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 H7C1C5 153 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SOCS2O14508 198 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 GNGT2O14610 69 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SGCEO43556 437 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 NDUFA2O43678 99 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PLPP2O43688 288 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 TIMM8AO60220 97 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PPP1R3DO95685 299 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 CLPTM1O96005 669 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 RENP00797 406 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 IGHV1-46P01743 117 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 LIPFP07098 398 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ANXA8P13928 327 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ZNF32P17041 273 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 IL2RGP31785 369 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 MDH2P40926 338 aaKnown RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 MAGEB1P43366 347 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 CENPAP49450 140 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 LCN6P62502 163 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ACTG1P63261 375 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 TNFAIP6P98066 277 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PPP1R8Q12972 351 aaKnown RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ENDOGQ14249 297 aaKnown RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SNCBQ16143 134 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 C1orf146Q5VVC0 180 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 CCDC121Q6ZUS5 278 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 TMEM179BQ7Z7N9 219 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 LRRC28Q86X40 367 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR6V1Q8N148 313 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ZNF283Q8N7M2 679 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SPERTQ8NA61 448 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ICA1LQ8NDH6 482 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR2T33Q8NG76 320 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR52L1Q8NGH7 329 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR8D4Q8NGM9 314 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR4K13Q8NH42 304 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SLC25A40Q8TBP6 338 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 YIPF5Q969M3 257 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 APOBEC3DQ96AK3 386 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 NMNAT3Q96T66 252 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 NIPSNAP1Q9BPW8 284 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 TSSK6Q9BXA6 273 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PLA2G12AQ9BZM1 189 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 OR2J1Q9GZK6 312 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 WNT5BQ9H1J7 359 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 EGLN3Q9H6Z9 239 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 SP140LQ9H930 580 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PDP1Q9P0J1 537 aaPredicted RBP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 KCNG2Q9UJ96 466 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 B9D1Q9UPM9 204 aa5.3□□□□□ -1.56
HOXB3-209ENST00000478644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
HOXB3-209ENST00000478644 ALPK2Q86TB3 2170 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 OR6C68A6NDL8 312 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 LYNX1G3V0Z9 82 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 CLDN34H7C241 214 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 DCTN6O00399 190 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 SLC33A1O00400 549 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-209ENST00000478644 EBAG9O00559 213 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 SPRY3O43610 288 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 E2F6O75461 281 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 APOC1P02654 83 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 LYNX1P0DP58 116 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 FCGR1AP12314 374 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 IRF2P14316 349 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 MC5RP33032 325 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 CAMLGP49069 296 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 BLVRAP53004 296 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 SLC25A1P53007 311 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 ACTR3P61158 418 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 RPL15P61313 204 aaKnown RBP5.29□□□□□ -1.56
HOXB3-209ENST00000478644 BTG1P62324 171 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 HIST1H3AP68431 136 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 GLO1Q04760 184 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 PSG7Q13046 419 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 MAD2L1BPQ15013 274 aaPredicted RBP5.29□□□□□ -1.56
HOXB3-209ENST00000478644 ATP6AP1Q15904 470 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 ESCO2Q56NI9 601 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 CLEC12AQ5QGZ9 265 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 HIST2H3PS2Q5TEC6 136 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 FAHD1Q6P587 224 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 LEG1Q6P5S2 330 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 C16orf87Q6PH81 154 aa5.29□□□□□ -1.56
HOXB3-209ENST00000478644 FBXW12Q6X9E4 464 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms