RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 WNT2P09544 360 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 CCDC159P0C7I6 412 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 ZNF250P15622 560 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 RPL4P36578 427 aaKnown RBP3.4□□□□□ -1.87
VPS50-214ENST00000477935 MAGEA6P43360 314 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 KLF3P57682 345 aaPredicted RBP3.4□□□□□ -1.87
VPS50-214ENST00000477935 GNB2P62879 340 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 ZNF117Q03924 483 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 ZNF763Q0D2J5 394 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 NPRL3Q12980 569 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 HEPACAMQ14CZ8 416 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 STEAP4Q687X5 459 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 BAIAP2L2Q6UXY1 529 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 OR2L13Q8N349 312 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 CDRT4Q8N9R6 151 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 GATSQ8NAP1 163 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 OR4C13Q8NGP0 309 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 OR1B1Q8NGR6 318 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 RHOXF1Q8NHV9 184 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 SYNPRQ8TBG9 265 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 STAG3L4Q8TBR4 150 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 RFT1Q96AA3 541 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 ISOC1Q96CN7 298 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 MAGEB18Q96M61 343 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 BPIFA3Q9BQP9 254 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 NAT9Q9BTE0 207 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 LINC00470Q9BZP3 86 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 RAB18Q9NP72 206 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 DDX18Q9NVP1 670 aaKnown RBP3.4□□□□□ -1.87
VPS50-214ENST00000477935 CLEC5AQ9NY25 188 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 MYEF2Q9P2K5 600 aaKnown RBP3.4□□□□□ -1.87
VPS50-214ENST00000477935 MIOXQ9UGB7 285 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 SLC7A8Q9UHI5 535 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 SPATA2Q9UM82 520 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 FOXJ3Q9UPW0 622 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 DNAH10Q8IVF4 4471 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 IGHV1-69DA0A0B4J2H0 117 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 CENPVL3A0A0U1RRI6 287 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 KCNK2O95069 426 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FSTL3O95633 263 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 IGKV1D-16P01601 117 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 IGHV1-69P01742 117 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FBP1P09467 338 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 UROSP10746 265 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 PRPS2P11908 318 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 BCKDHAP12694 445 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 PGAM1P18669 254 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 IVDP26440 423 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 MDH2P40926 338 aaKnown RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 MAP3K8P41279 467 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ELK3P41970 407 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FRKP42685 505 aaPredicted RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 OR2B6P58173 313 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FGF12P61328 243 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 RPS27AP62979 156 aaKnown RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 QPRTQ15274 297 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 CD226Q15762 336 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 TOMM34Q15785 309 aaPredicted RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 GSG1Q2KHT4 349 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 RNF212Q495C1 297 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FBXO48Q5FWF7 155 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ZNF506Q5JVG8 444 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 SPANXN3Q5MJ09 141 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ZCCHC12Q6PEW1 402 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 CBLN3Q6UW01 205 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 COMMD6Q7Z4G1 85 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 MDP1Q86V88 176 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 TEX9Q8N6V9 391 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ZIC4Q8N9L1 334 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 OR6F1Q8NGZ6 308 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 C8orf46Q8TAG6 207 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 GPR148Q8TDV2 347 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 UBTD2Q8WUN7 234 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ANKRD49Q8WVL7 239 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 PCNPQ8WW12 178 aaKnown RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 ITLN1Q8WWA0 313 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 EXOSC8Q96B26 276 aaKnown RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 CHP1Q99653 195 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 BCL2L14Q9BZR8 327 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 SLC19A3Q9BZV2 496 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 ZNF350Q9GZX5 532 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 SP140LQ9H930 580 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 VIPAS39Q9H9C1 493 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 S100A14Q9HCY8 104 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 FAM212BQ9NTI7 297 aaPredicted RBP3.39□□□□□ -1.87
VPS50-214ENST00000477935 ACER3Q9NUN7 267 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 B3GNT2Q9NY97 397 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 CHRNA9Q9UGM1 479 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 CACNG2Q9Y698 323 aa3.39□□□□□ -1.87
VPS50-214ENST00000477935 SMIM30A4D0T7 59 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 KLLNB2CW77 178 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ZNF879B4DU55 563 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TM9SF1O15321 606 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ZNF264O43296 627 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 ENSAO43768 121 aaKnown RBP3.38□□□□□ -1.87
VPS50-214ENST00000477935 CLN5O75503 358 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TPM3P06753 285 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 HCKP08631 526 aa3.38□□□□□ -1.87
VPS50-214ENST00000477935 TPM1P09493 284 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms