RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 OR2T27Q8NH04 317 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 OR52N1Q8NH53 320 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 MUL1Q969V5 352 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 R3HDM4Q96D70 268 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 MRPL48Q96GC5 212 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 SH3GL3Q99963 347 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ALG8Q9BVK2 526 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 YIPF3Q9GZM5 350 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 C1orf198Q9H425 327 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 WDR76Q9H967 626 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 MSL2Q9HCI7 577 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ERVK13-1Q9NX77 482 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 FBLN5Q9UBX5 448 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM14AQ9Y6G1 99 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 U3KQK5 164 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 STARD9Q9P2P6 4700 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 LCE6AA0A183 80 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 A0A1W2PQL4 384 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ANKRD61A6NGH8 418 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 P2RY10O00398 339 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 PHYHO14832 338 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF205O95201 554 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 TFAP2AP05549 437 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 LIMS3P0CW19 117 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 LIMS4P0CW20 117 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF823P16415 610 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 JUNBP17275 347 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 CD33P20138 364 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 MSR1P21757 451 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 LAP3P28838 519 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 TGFBR2P37173 567 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF133P52736 654 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 WNT4P56705 351 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 SPHARQ15513 63 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 MED22Q15528 200 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 DMRTC1Q5HYR2 192 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ZBTB37Q5TC79 503 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 UBE2UQ5VVX9 321 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC18B1Q6NT16 456 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 TMEM53Q6P2H8 277 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC25A47Q6Q0C1 308 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 TMPRSS11AQ6ZMR5 421 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 VASH1Q7L8A9 365 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 FAM220AQ7Z4H9 259 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 GPR141Q7Z602 305 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC22A24Q8N4F4 322 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF454Q8N9F8 522 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 SCCPDHQ8NBX0 429 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 TTTY10Q9BZA0 68 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 POLE4Q9NR33 117 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 BATF3Q9NR55 127 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 MRPL22Q9NWU5 206 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 KCNG2Q9UJ96 466 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 LAMP5Q9UJQ1 280 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 VPREB3Q9UKI3 123 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 PPP1R3CQ9UQK1 317 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 UGT2A1Q9Y4X1 527 aa8.02□□□□□ -1.13
SMARCB1-206ENST00000477836 IGHV1-69DA0A0B4J2H0 117 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 IQCMA0A1B0GVH7 501 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 BTBD17A6NE02 478 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TOX4O94842 621 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 INMTO95050 263 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 IGHV1-69P01742 117 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 HSMCR30P0CW71 290 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TNFRSF1AP19438 455 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CDAP32320 146 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CFHR2P36980 270 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 ALDH3B2P48448 385 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 GP2P55259 537 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 MRPS34P82930 218 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF85Q03923 595 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 GALEQ14376 348 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 MEP1BQ16820 701 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TIGD6Q17RP2 521 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 ZMAT1Q5H9K5 638 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OTPQ5XKR4 325 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 LRFN4Q6PJG9 635 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 ZNF322Q6U7Q0 402 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 C1orf122Q6ZSJ8 110 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 FOXL2NBQ6ZUU3 175 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 DPY19L4Q7Z388 723 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 LHFPL3Q86UP9 236 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 KLHDC1Q8N7A1 406 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 NANOGP1Q8N7R0 232 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR4F17Q8NGA8 305 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR8B3Q8NGG8 313 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OTOSQ8NHW6 89 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 SLC25A40Q8TBP6 338 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 KLF14Q8TD94 323 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 ASB17Q8WXJ9 295 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 LHX4Q969G2 390 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR4F4Q96R69 305 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR8B2Q96RD0 313 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 TBX15Q96SF7 602 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 CDADC1Q9BWV3 514 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 OR2J1Q9GZK6 312 aa8.01□□□□□ -1.13
SMARCB1-206ENST00000477836 EMC7Q9NPA0 242 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms