RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ZNF782Q6ZMW2 699 aaPredicted RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 SSX8Q7RTT4 187 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 MRPL21Q7Z2W9 205 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 FAM169BQ8N8A8 192 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CHST4Q8NCG5 386 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 ST6GAL2Q96JF0 529 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 C1orf147Q96MC9 270 aaPredicted RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 SCGB3A2Q96PL1 93 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 TRIB1Q96RU8 372 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 GAL3ST1Q99999 423 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 OR51J1Q9H342 316 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 NOX3Q9HBY0 568 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 PLSCR4Q9NRQ2 329 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 B3GNT2Q9NY97 397 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 EIF3KQ9UBQ5 218 aaKnown RBP6.89□□□□□ -1.31
VMA21-203ENST00000477649 HSF4Q9ULV5 492 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 ANAPC10Q9UM13 185 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 ING4Q9UNL4 249 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 MPC1Q9Y5U8 109 aa6.89□□□□□ -1.31
VMA21-203ENST00000477649 CACNA1CQ13936 2221 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 TRAV6A0A075B6T7 132 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 A0A0A6YYJ9 748 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 A0A0B4J293 547 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 UBE2QL1A1L167 161 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 C5orf49A4QMS7 147 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 MBD3L4A6NDZ8 208 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 MBD3L3A6NE82 208 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 MBD3L5A6NJ08 208 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 OR5B21A6NL26 309 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 FIGNL2A6NMB9 653 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 E9PLN8 166 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 RRP8O43159 456 aaKnown RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 CREBL2O60519 120 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 CRTAPO75718 401 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 IGHV3-9P01782 118 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 HLA-HP01893 362 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 MGMTP16455 207 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 SELEP16581 610 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 COX5AP20674 150 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ACKR3P25106 362 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ECI1P42126 302 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 OR3A4PP47883 348 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 VEGFCP49767 419 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 TAS2R46P59540 309 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ZP1P60852 638 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ZNF92Q03936 586 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 PLA2G7Q13093 441 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 GK2Q14410 553 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 C3AR1Q16581 482 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ACSF3Q4G176 576 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 SLC22A6Q4U2R8 563 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 RNASE10Q5GAN6 216 aaKnown RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 ATAD3CQ5T2N8 411 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 TMEM17Q86X19 198 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ARRDC1Q8N5I2 433 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 ACBD4Q8NC06 268 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 Q8NFD4 153 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 OR51T1Q8NGJ9 327 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 MBD3L2Q8NHZ7 208 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 FGFBP3Q8TAT2 258 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 GPR137Q96N19 417 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 HIST1H2AAQ96QV6 131 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 OCSTAMPQ9BR26 566 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 SOX7Q9BT81 388 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 SELENOIQ9C0D9 397 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 RANBP3Q9H6Z4 567 aaPredicted RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 IFT46Q9NQC8 304 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 PRSS50Q9UI38 385 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 PAIP2BQ9ULR5 123 aaKnown RBP6.88□□□□□ -1.31
VMA21-203ENST00000477649 EDARQ9UNE0 448 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 MSRB2Q9Y3D2 182 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 CSAG2Q9Y5P2 127 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 NCKAP5O14513 1909 aa6.88□□□□□ -1.31
VMA21-203ENST00000477649 LOC100509620A0A075B734 347 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 A0A096LPE4 126 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 ANKRD30BLA7E2S9 258 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 POM121CA8CG34 1229 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 MFNGO00587 321 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 C1QBP02746 253 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 IFNA6P05013 189 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 PATE4P0C8F1 98 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 TMEM225BP0DP42 221 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 ANXA3P12429 323 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 EDN3P14138 238 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 CBR1P16152 277 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 TIMP3P35625 211 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 CCR6P51684 374 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 UBE2MP61081 183 aaKnown RBP6.87□□□□□ -1.31
VMA21-203ENST00000477649 PMP22Q01453 160 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 HGFACQ04756 655 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 RSU1Q15404 277 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 CEACAM21Q3KPI0 293 aa6.87□□□□□ -1.31
VMA21-203ENST00000477649 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms