RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 CMTM1Q8IZ96 169 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF764Q96H86 408 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC35A5Q9BS91 424 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 URGCP-MRPS24S4R325 110 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 IGKV1-8A0A0C4DH67 115 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 XKRYO14609 159 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 PDGFBP01127 241 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 SSR2P43308 183 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 PMS2P11Q13670 270 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 PRSS8Q16651 343 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 NIPAL3Q6P499 406 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 COX18Q8N8Q8 333 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 OR4X1Q8NH49 305 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 MFSD8Q8NHS3 518 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 OR5P2Q8WZ92 322 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 TVP23CQ96ET8 276 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 GINS3Q9BRX5 216 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 NEUROD4Q9HD90 331 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 TAAR2Q9P1P5 351 aa11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 MRPS33Q9Y291 106 aaKnown RBP11.25□□□□□ -0.61
RTFDC1-207ENST00000477573 SHISA7A6NL88 538 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 FTCDNL1E5RQL4 147 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 FCMRO60667 390 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 PET100P0DJ07 73 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 TGM3Q08188 693 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC25A42Q86VD7 318 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF615Q8N8J6 731 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 EXD3Q8N9H8 876 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 MORN4Q8NDC4 146 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 FAM174AQ8TBP5 190 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 JSRP1Q96MG2 331 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 CIB3Q96Q77 187 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 CMKLR1Q99788 373 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 HIPK2Q9H2X6 1198 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 C6orf106Q9H6K1 298 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 EGLN3Q9H6Z9 239 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 FBXO34Q9NWN3 711 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 OR5V1Q9UGF6 321 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF107Q9UII5 783 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 CYP8B1Q9UNU6 501 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 PSG11Q9UQ72 335 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 STRAPQ9Y3F4 350 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 PROB1E7EW31 1015 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 DNAJB6O75190 326 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF217O75362 1048 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 OR13C7P0DN81 318 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 PTHLHP12272 177 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 FPR2P25090 351 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 SOAT1P35610 550 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 BCL6P41182 706 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 TSFMP43897 325 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ID4P47928 161 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 MANFP55145 182 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 KIR2DS3Q14952 304 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 ZIC1Q15915 447 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 C1orf189Q5VU69 101 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 TEX43Q6ZNM6 134 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 Q6ZS52 159 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 MED25Q71SY5 747 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 SYT9Q86SS6 491 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 TMEM229BQ8NBD8 167 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 SPACA9Q96E40 222 aaPredicted RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 PRRX2Q99811 253 aa11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 GOLGA4Q13439 2230 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-207ENST00000477573 C5orf51A6NDU8 294 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 C10orf142B7Z368 130 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 OR6A2O95222 327 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 CSTBP04080 98 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 CD3DP04234 171 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 IGHV4-34P06331 123 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 DANCRP0C864 163 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 ALPPL2P10696 532 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 PEBP1P30086 187 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 ACVR1BP36896 505 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 RPS15AP62244 130 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 RHOGP84095 191 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 RPL7L1Q6DKI1 246 aaKnown RBP11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 TSTD1Q8NFU3 115 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 OR13H1Q8NG92 308 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC6A7Q99884 636 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 FNDC11Q9BVV2 318 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 ANKRD10Q9NXR5 420 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 FBXO4Q9UKT5 387 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 V9GY05 133 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 CLDN34H7C241 214 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 SCDO00767 359 aa11.23□□□□□ -0.61
RTFDC1-207ENST00000477573 CDIPTO14735 213 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms