RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 HSD17B6O14756 317 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 GLI4P10075 376 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.33
HDAC6-220ENST00000477528 FAM74A1Q5RGS3 127 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 ATPAF1Q5TC12 328 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-220ENST00000477528 SUMF1Q8NBK3 374 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 HS3ST1O14792 307 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 SFT2D2O95562 160 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 CCL3P10147 92 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 S100PP25815 95 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 PMS2CLQ68D20 193 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 OR2AE1Q8NHA4 323 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 ZNF519Q8TB69 540 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 RAB18Q9NP72 206 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 OPN4Q9UHM6 478 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 POLDIP2Q9Y2S7 368 aa12.96□□□□□ -0.33
HDAC6-220ENST00000477528 E5RGE8 158 aa12.96□□□□□ -0.34
HDAC6-220ENST00000477528 SNRNP70P08621 437 aaKnown RBP12.96□□□□□ -0.34
HDAC6-220ENST00000477528 M6PRP20645 277 aa12.96□□□□□ -0.34
HDAC6-220ENST00000477528 LGALSLQ3ZCW2 172 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-220ENST00000477528 Q7L0L9 218 aa12.96□□□□□ -0.34
HDAC6-220ENST00000477528 LIN37Q96GY3 246 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-220ENST00000477528 OPA3Q9H6K4 179 aa12.96□□□□□ -0.34
HDAC6-220ENST00000477528 PRMT8Q9NR22 394 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-220ENST00000477528 NSG2Q9Y328 171 aa12.96□□□□□ -0.34
HDAC6-220ENST00000477528 CACNA1IQ9P0X4 2223 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TOR1AO14656 332 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 HGDQ93099 445 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 MUCL1Q96DR8 90 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 LYPD3O95274 346 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TTRP02766 147 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 VSIG8P0DPA2 414 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 RPA2P15927 270 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 FUT3P21217 361 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 OR5AS1Q8N127 324 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 RIMS4Q9H426 269 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 FIGNL2A6NMB9 653 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 LRP3O75074 770 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 HPP00738 406 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 ADRB1P08588 477 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 SELEP16581 610 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF629Q9UEG4 869 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 LIFP15018 202 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TNFSF4P23510 183 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 JMJD6Q6NYC1 403 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 OR11G2Q8NGC1 345 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 ADAT3Q96EY9 351 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 TMEM9BQ9NQ34 198 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 FBXO7Q9Y3I1 522 aa12.95□□□□□ -0.34
HDAC6-220ENST00000477528 MRPS18BQ9Y676 258 aaKnown RBP12.95□□□□□ -0.34
HDAC6-220ENST00000477528 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 ADRA2CP18825 462 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 GAS1P54826 345 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 RPP30P78346 268 aaKnown RBP12.94□□□□□ -0.34
HDAC6-220ENST00000477528 B3GNTL1Q67FW5 361 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF649Q9BS31 505 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 HINT2Q9BX68 163 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 PNPP00491 289 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 HBG1P69891 147 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 HBG2P69892 147 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 ALX4Q9H161 411 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-220ENST00000477528 HBE1P02100 147 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 GLAP06280 429 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 IFITM2Q01629 132 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 TMEM268Q5VZI3 342 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 FDX2Q6P4F2 183 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 C6orf201Q7Z4U5 140 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 FAM185AQ8N0U4 392 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 OR5AP2Q8NGF4 316 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 RDH5Q92781 318 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 SUCNR1Q9BXA5 334 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 MS4A18H0YCH9 400 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 DNPH1O43598 174 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 ADAM11O75078 769 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 TUSC2O75896 110 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 GRPP07492 148 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 TUBG1P23258 451 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 TLE4Q04727 773 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 MS4A18Q3C1V0 323 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 H3F3CQ6NXT2 135 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 GPR137Q96N19 417 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 OR5B12Q96R08 314 aa12.94□□□□□ -0.34
HDAC6-220ENST00000477528 KNTC1P50748 2209 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 A0A0G2JK05 382 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 ZNF732B4DXR9 585 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 SOCS1O15524 211 aa12.93□□□□□ -0.34
HDAC6-220ENST00000477528 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-220ENST00000477528 PABPC1L2AQ5JQF8 200 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms