RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TCEAL6Q6IPX3 200 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 OR13G1Q8NGZ3 307 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 MEGF10Q96KG7 1140 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 LPAR5Q9H1C0 372 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 CEP192Q8TEP8 1941 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 SCDO00767 359 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 GPR137BO60478 399 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 INSM1Q01101 510 aaPredicted RBP13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 FZD2Q14332 565 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF542PQ5EBM4 170 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 C1orf140Q5VVS0 124 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 OR52N4Q8NGI2 321 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 KCNG3Q8TAE7 436 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 PIGQQ9BRB3 760 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
CLSTN1-205ENST00000477264 CACNA1CQ13936 2221 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 OR5H15A6NDH6 313 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 TLCD2A6NGC4 264 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 OR5H1A6NKK0 313 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 K7ESF4 209 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 MMP16P51512 607 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 ACKR1Q16570 336 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 AADACL3Q5VUY0 350 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 OR5D14Q8NGL3 314 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 BAHD1Q8TBE0 780 aaPredicted RBP13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 GPBAR1Q8TDU6 330 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 ADAMTS18Q8TE60 1221 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 DGAT2Q96PD7 388 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 PRODH2Q9UF12 536 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 TMEM269A0A1B0GVZ9 245 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 EML2O95834 649 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 PRH1P02810 166 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 CTLA4P16410 223 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF823P16415 610 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 GNALP38405 381 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 GPR3P46089 330 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 AFF3P51826 1226 aaKnown RBP13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 CHAF1BQ13112 559 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 CD226Q15762 336 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 PCK2Q16822 640 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 C1QL3Q5VWW1 255 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 SLC22A25Q6T423 547 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF101Q8IZC7 436 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 FGGYQ96C11 551 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 PRR13Q9NZ81 148 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 FBXO7Q9Y3I1 522 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 SLCO1B1Q9Y6L6 691 aa13.48□□□□□ -0.25
CLSTN1-205ENST00000477264 TRBV23OR9-2A0A075B6M9 112 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF724A8MTY0 619 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 C11orf98E9PRG8 122 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 H7C1Q1 480 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 P2RY10O00398 339 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BKO60814 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BJP06899 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BOP23527 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BBP33778 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 PPM1FP49593 454 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BDP58876 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BCP62807 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 GAMTQ14353 236 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST2H2BEQ16778 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 CDPF1Q6NVV7 123 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 COX15Q7KZN9 410 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ST7LQ8TDW4 575 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BHQ93079 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 NTNG2Q96CW9 530 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BNQ99877 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 HIST1H2BMQ99879 126 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 URM1Q9BTM9 101 aaKnown RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 TCEAL2Q9H3H9 227 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 NELFAQ9H3P2 528 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF726A6NNF4 738 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 OR13C7P0DN81 318 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 NDUFB7P17568 137 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ZNF93P35789 620 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 FUT7Q11130 342 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ELOBQ15370 118 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 RTL6Q6ICC9 239 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 MARCH3Q86UD3 253 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 SGPP2Q8IWX5 399 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 GATSQ8NAP1 163 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 MFSD8Q8NHS3 518 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 TMEM68Q96MH6 324 aa13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 NOL4LQ96MY1 436 aaPredicted RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
CLSTN1-205ENST00000477264 TMEM59Q9BXS4 323 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms