RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 RGCCQ9H4X1 137 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 CCDC134Q9H6E4 229 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 CENPMQ9NSP4 180 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 ONECUT1Q9UBC0 465 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 DNAJB11Q9UBS4 358 aa5.99□□□□□ -1.45
BRCA1-214ENST00000477152 hCG_1809904A0A1W2PP81 198 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1W2PPE2 198 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1W2PR64 198 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1W2PRV1 198 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 C5orf63A6NC05 138 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 TMEM210A6NLX4 147 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ANXA2P07355 339 aaKnown RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SPARCP09486 303 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 IER3P46695 156 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 MNAT1P51948 309 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF92Q03936 586 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 MPPED2Q15777 294 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 TEX30Q5JUR7 227 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RUSC1-AS1Q66K80 236 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 C1orf122Q6ZSJ8 110 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 LCNL1Q6ZST4 164 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 Q6ZTK2 550 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RHOUQ7L0Q8 258 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SHFQ7M4L6 423 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 DCXRQ7Z4W1 244 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 TBX15Q96SF7 602 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 NEU1Q99519 415 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RBM4BQ9BQ04 359 aaKnown RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RTL8AQ9BWD3 113 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SIRPDQ9H106 197 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 C16orf95Q9H693 158 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RPUSD1Q9UJJ7 312 aaKnown RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF391Q9UJN7 358 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 MPC1Q9Y5U8 109 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 CDH10Q9Y6N8 788 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 OR6C68A6NDL8 312 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 RIIAD1A6NNX1 92 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 DCTN6O00399 190 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 GLCEO94923 617 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SFTPBP07988 381 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 CSF1P09603 554 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 MMP9P14780 707 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF3P17036 446 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 POU1F1P28069 291 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 GSSP48637 474 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 UCP3P55916 312 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ACSM1Q08AH1 577 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SF3A3Q12874 501 aaKnown RBP eCLIP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 GLYATL3Q5SZD4 288 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 C8orf82Q6P1X6 216 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 VMO1Q7Z5L0 202 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ZSCAN4Q8NAM6 433 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 OR56B2PQ8NGI1 322 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 OR9Q1Q8NGQ5 310 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 OR10Z1Q8NGY1 313 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 LINC01006Q8NI28 216 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 LRRC29Q8WV35 223 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 ST8SIA2Q92186 375 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 SLAMF6Q96DU3 332 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 C7orf34Q96L11 122 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 TEX12Q9BXU0 123 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 PNRC2Q9NPJ4 139 aaKnown RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 PDP1Q9P0J1 537 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-214ENST00000477152 VPREB3Q9UKI3 123 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 N6AMT1Q9Y5N5 214 aa5.98□□□□□ -1.45
BRCA1-214ENST00000477152 M0QYG6 137 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 ZNF593O00488 134 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 DIRAS1O95057 198 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 LHBP01229 141 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 HSD17B1P14061 328 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 H2AFXP16104 143 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OTX1P32242 354 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 PRKXP51817 358 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 SLC25A1P53007 311 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 FXYD6P3P58550 94 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 GK3PQ14409 553 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 SEC23BQ15437 767 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 RSPO1Q2MKA7 263 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OTPQ5XKR4 325 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 C16orf89Q6UX73 402 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 RASSF6Q6ZTQ3 369 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 NAA40Q86UY6 237 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 LNX2Q8N448 690 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 GCSAMQ8N6F7 178 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 C19orf18Q8NEA5 215 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR2T33Q8NG76 320 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR1M1Q8NGA1 313 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 OR5D13Q8NGL4 314 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 H1FXQ92522 213 aaKnown RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 SPSB4Q96A44 273 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 TINAGL1Q9GZM7 467 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 MED4Q9NPJ6 270 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 CTSZQ9UBR2 303 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 MGAM2Q2M2H8 2515 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 TET2Q6N021 2002 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-214ENST00000477152 A0A0U1RQK1 487 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 A0A1W2PQ09 198 aa5.97□□□□□ -1.45
BRCA1-214ENST00000477152 M0R1W7 72 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms