RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SELENOFO60613 162 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 RHBDL1O75783 438 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 LYNP07948 512 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 H2BFMP0C1H6 154 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 EFNB2P52799 333 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 PSMA6P60900 246 aaKnown RBP10.69□□□□□ -0.7
MRPL55-228ENST00000476267 GMFBP60983 142 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 MS4A2Q01362 244 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 NCR3LG1Q68D85 454 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 PIGWQ7Z7B1 504 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 FTMTQ8N4E7 242 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 OR10G2Q8NGC3 310 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 OR8B12Q8NGG6 310 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 FAM110DQ8TAY7 271 aaPredicted RBP10.69□□□□□ -0.7
MRPL55-228ENST00000476267 CFHR4Q92496 578 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 MED30Q96HR3 178 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 FEVQ99581 238 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 REEP1Q9H902 201 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 NLKQ9UBE8 527 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 ARRDC5A6NEK1 342 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 OR2AT4A6NND4 320 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 H3BUX3 64 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 IGLV3-1P01715 115 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 PSG2P11465 335 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 SLC2A5P22732 501 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 BEAN1Q3B7T3 259 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 KPRPQ5T749 579 aaPredicted RBP10.68□□□□□ -0.7
MRPL55-228ENST00000476267 TRPM8Q7Z2W7 1104 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 ZDHHC23Q8IYP9 409 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 C11orf42Q8N5U0 333 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 ZNRF1Q8ND25 227 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 TEX47Q8TBZ9 253 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 PIGCQ92535 297 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 DUS3LQ96G46 650 aaKnown RBP10.68□□□□□ -0.7
MRPL55-228ENST00000476267 SDSLQ96GA7 329 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 RNF170Q96K19 258 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 MEGF9Q9H1U4 602 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 PPA2Q9H2U2 334 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 OR51I2Q9H344 312 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 MUC13Q9H3R2 512 aa10.68□□□□□ -0.7
MRPL55-228ENST00000476267 ELL3Q9HB65 397 aaPredicted RBP10.68□□□□□ -0.7
MRPL55-228ENST00000476267 PRODHO43272 600 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 PAHP00439 452 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 CSF1P09603 554 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 KIR2DS4P43632 304 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 GK3PQ14409 553 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 HERPUD1Q15011 391 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 CEACAM21Q3KPI0 293 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 PLBD1Q6P4A8 553 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 CPLX4Q7Z7G2 160 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 TMEM179BQ7Z7N9 219 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 PIFOQ8TCI5 191 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 OR51V1Q9H2C8 321 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 FAM206AQ9NX38 181 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 ARL2BPQ9Y2Y0 163 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 SIGLEC9Q9Y336 463 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 LRP12Q9Y561 859 aa10.67□□□□□ -0.7
MRPL55-228ENST00000476267 TRBV23-1A0A0A0MS06 115 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 A0A0U1RQV5 110 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 A0A1W2PQ09 198 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 G3V4G9 280 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 H3BN98 237 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 NDUFB7P17568 137 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 ALOX5APP20292 161 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 GLRA1P23415 457 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 GABRA5P31644 462 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 GPM6AP51674 278 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 CDK5Q00535 292 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 TRIM25Q14258 630 aaKnown RBP10.66□□□□□ -0.7
MRPL55-228ENST00000476267 AANATQ16613 207 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 FAM98BQ52LJ0 330 aaKnown RBP10.66□□□□□ -0.7
MRPL55-228ENST00000476267 HIST2H2BDQ6DRA6 164 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 KCTD8Q6ZWB6 473 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.66□□□□□ -0.7
MRPL55-228ENST00000476267 ARHGAP24Q8N264 748 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 BBS1Q8NFJ9 593 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 THEM6Q8WUY1 208 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 AQP3Q92482 292 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 RORBQ92753 470 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 SSX3Q99909 188 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 C19orf12Q9NSK7 152 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 TAS2R1Q9NYW7 299 aa10.66□□□□□ -0.7
MRPL55-228ENST00000476267 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
MRPL55-228ENST00000476267 ANKRD61A6NGH8 418 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 PRR32B1ATL7 298 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 ZNF732B4DXR9 585 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 PRR23D1E9PI22 279 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-228ENST00000476267 CHST1O43916 411 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 MTRF1O75570 445 aaKnown RBP10.65□□□□□ -0.7
MRPL55-228ENST00000476267 DCTN3O75935 186 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 OPN1MWP04001 364 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 PRR23D2P0DMB1 279 aaPredicted RBP10.65□□□□□ -0.7
MRPL55-228ENST00000476267 OPN1MW2P0DN77 364 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 OPN1MW3P0DN78 364 aa10.65□□□□□ -0.7
MRPL55-228ENST00000476267 RAP2AP10114 183 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms