RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MPC1Q9Y5U8 109 aa5.75□□□□□ -1.49
HDAC3-207ENST00000475549 CCDC182A6NF36 153 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 AQP12BA6NM10 295 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 OR2AT4A6NND4 320 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 PRR23D1E9PI22 279 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 SIGLEC5O15389 551 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 MAGEB4O15481 346 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 PRODHO43272 600 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 SRSF10O75494 262 aaKnown RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 IGLV3-1P01715 115 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 APOC1P02654 83 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 CRYBA1P05813 215 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ACAA1P09110 424 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 PRR23D2P0DMB1 279 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 OSMP13725 252 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 CFL1P23528 166 aaKnown RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 PAX6P26367 422 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 EPHA2P29317 976 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 GNALP38405 381 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 GPM6AP51674 278 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ERVFRD-1P60508 538 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 EFNB1P98172 346 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 MFGE8Q08431 387 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 KLRD1Q13241 179 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 GK3PQ14409 553 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 CEP78Q5JTW2 689 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 HIST2H2BDQ6DRA6 164 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 C17orf107Q6ZR85 190 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 SLC36A1Q7Z2H8 476 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 TRPM8Q7Z2W7 1104 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 BCDIN3DQ7Z5W3 292 aaKnown RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 AQP12AQ8IXF9 295 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 CD177Q8N6Q3 437 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ZNRF1Q8ND25 227 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 OR10Z1Q8NGY1 313 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 DMRTB1Q96MA1 342 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 TEAD3Q99594 435 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 RBM4BQ9BQ04 359 aaKnown RBP5.74□□□□□ -1.49
HDAC3-207ENST00000475549 THTPAQ9BU02 230 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 C16orf95Q9H693 158 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ZNRD1Q9P1U0 126 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 KIF17Q9P2E2 1029 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ONECUT1Q9UBC0 465 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 COPS3Q9UNS2 423 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 RNF114Q9Y508 228 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 LRP12Q9Y561 859 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 CMYA5Q8N3K9 4069 aa5.74□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF816-ZNF321PA0A0X1KG74 233 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM269A0A1B0GVZ9 245 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 TCRBV3S1A0A5B6 114 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 TMEM210A6NLX4 147 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 ANXA2P2A6NMY6 339 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF732B4DXR9 585 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 NPFFO15130 113 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PRKYO43930 277 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MITFO75030 526 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MTRF1O75570 445 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 TSPAN9O75954 239 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 FAM107AO95990 144 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 HMGN1P05114 100 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MRPL3P09001 348 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PSG2P11465 335 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PAICSP22234 425 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SAA4P35542 130 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 DAPP51397 102 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PSMA6P60900 246 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 RPL15P61313 204 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 ROM1Q03395 351 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 CEACAM21Q3KPI0 293 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MIDNQ504T8 468 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 LRRC10Q5BKY1 277 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SLC35D3Q5M8T2 416 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SLC35E4Q6ICL7 350 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 CRIP3Q6Q6R5 217 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 C1orf122Q6ZSJ8 110 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 ZDHHC23Q8IYP9 409 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PAPD5Q8NDF8 572 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 OR51E1Q8TCB6 317 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PIFOQ8TCI5 191 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 NPRL2Q8WTW4 380 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 AQP3Q92482 292 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SLC7A6OSQ96CW6 309 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 DUS3LQ96G46 650 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SDSLQ96GA7 329 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MED30Q96HR3 178 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 LRGUKQ96M69 825 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 ZNF488Q96MN9 340 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 MICU1Q9BPX6 476 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 RTL8AQ9BWD3 113 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 PBOV1Q9GZY1 135 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 DNTTIP1Q9H147 329 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 METTL8Q9H825 291 aaKnown RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 YY1AP1Q9H869 796 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SLC25A19Q9HC21 320 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 GPR84Q9NQS5 396 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 NLKQ9UBE8 527 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SLC25A10Q9UBX3 287 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-207ENST00000475549 VPREB3Q9UKI3 123 aa5.73□□□□□ -1.49
HDAC3-207ENST00000475549 SIGLEC9Q9Y336 463 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms