RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 HAO2Q9NYQ3 351 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF391Q9UJN7 358 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ACOD1A6NK06 481 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 TMEM210A6NLX4 147 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ANXA2P2A6NMY6 339 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 AKR7A2O43488 359 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 TTRP02766 147 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 GPM6AP51674 278 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 C11orf91Q3C1V1 193 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 MEPCEQ7L2J0 689 aaKnown RBP11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ZDHHC23Q8IYP9 409 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF679Q8IYX0 411 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 TCEANCQ8N8B7 351 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ANGPTL6Q8NI99 470 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 GAFA1Q96PS6 74 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 APOL4Q9BPW4 351 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 GPR84Q9NQS5 396 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 KRT84Q9NSB2 600 aa11.62□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF816-ZNF321PA0A0X1KG74 233 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 G3V2T6 193 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 ECDO95905 644 aaPredicted RBP11.61□□□□□ -0.55
UPF3A-204ENST00000475218 MELTFP08582 738 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 BPIFB3P59826 476 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 RELBQ01201 579 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 PRB3Q04118 309 aaPredicted RBP11.61□□□□□ -0.55
UPF3A-204ENST00000475218 DGUOKQ16854 277 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 CDONQ4KMG0 1287 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 CEP78Q5JTW2 689 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 C16orf87Q6PH81 154 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 KCTD18Q6PI47 426 aaPredicted RBP11.61□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF788Q6ZQV5 615 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 PLEKHG7Q6ZR37 379 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 SSX6Q7RTT6 188 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 FTMTQ8N4E7 242 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 Q8N7P7 452 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 TMEM163Q8TC26 289 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 LRTOMTQ8WZ04 291 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 LHX4Q969G2 390 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 CNN2Q99439 309 aaKnown RBP11.61□□□□□ -0.55
UPF3A-204ENST00000475218 CNTD2Q9H8S5 307 aa11.61□□□□□ -0.55
UPF3A-204ENST00000475218 NUFIP1Q9UHK0 495 aaKnown RBP11.61□□□□□ -0.55
UPF3A-204ENST00000475218 A0A1B0GTI1 187 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF254O75437 659 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 FAHP16930 419 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 MDKP21741 143 aaPredicted RBP11.6□□□□□ -0.55
UPF3A-204ENST00000475218 IKZF1Q13422 519 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 CEACAM21Q3KPI0 293 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 METTL11BQ5VVY1 283 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 FAM71F1Q96KD3 344 aaPredicted RBP11.6□□□□□ -0.55
UPF3A-204ENST00000475218 IL4I1Q96RQ9 567 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 CIB1Q99828 191 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 DCTN5Q9BTE1 182 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 MROQ9BYG7 248 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 CHIAQ9BZP6 476 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 UNKLQ9H9P5 680 aaKnown RBP11.6□□□□□ -0.55
UPF3A-204ENST00000475218 ABCB9Q9NP78 766 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 MRM2Q9UI43 246 aaKnown RBP11.6□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF222Q9UK12 451 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 AP4S1Q9Y587 144 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 KPTNQ9Y664 436 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 CMYA5Q8N3K9 4069 aa11.6□□□□□ -0.55
UPF3A-204ENST00000475218 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 A0A0U1RQK1 487 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF732B4DXR9 585 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 OMGP23515 440 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 MAP2K3P46734 347 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 CXCR4P61073 352 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 PDCD1Q15116 288 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 LCN1P1Q5VSP4 162 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 ZNF322Q6U7Q0 402 aaPredicted RBP11.59□□□□□ -0.55
UPF3A-204ENST00000475218 Q6ZSR3 168 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 VMO1Q7Z5L0 202 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 PDZD9Q8IXQ8 264 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 SLC35F2Q8IXU6 374 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 GATAD2BQ8WXI9 593 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 ASB17Q8WXJ9 295 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 TNFRSF19Q9NS68 423 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 ACOXLQ9NUZ1 547 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 FASP25445 335 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 RIDAP52758 137 aaKnown RBP11.59□□□□□ -0.55
UPF3A-204ENST00000475218 GNG3P63215 75 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 TMEM42Q69YG0 159 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 SLC36A1Q7Z2H8 476 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 SGMS2Q8NHU3 365 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 FAM81AQ8TBF8 368 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 AQP3Q92482 292 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 TMIGD2Q96BF3 282 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 DNTTIP1Q9H147 329 aa11.59□□□□□ -0.55
UPF3A-204ENST00000475218 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms