RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 OR6Q1Q8NGQ2 317 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 RGP1Q92546 391 aaPredicted RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 NEURL3Q96EH8 262 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 ZNF396Q96N95 335 aaPredicted RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 COL21A1Q96P44 957 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 TEKT3Q9BXF9 490 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 RSPO3Q9BXY4 272 aaPredicted RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 ANKRD60Q9BZ19 345 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 UPF3BQ9BZI7 483 aaKnown RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 API5Q9BZZ5 524 aaKnown RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 TRIM4Q9C037 500 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 CENPHQ9H3R5 247 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 CLSTN2Q9H4D0 955 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 TMEM38AQ9H6F2 299 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 CLN8Q9UBY8 286 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 PAIP2BQ9ULR5 123 aaKnown RBP2.4□□□□□ -2.03
SDHB-204ENST00000475049 RFNGQ9Y644 331 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 ANKRD50Q9ULJ7 1429 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 SPG11Q96JI7 2443 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 EVC2Q86UK5 1308 aa2.4□□□□□ -2.03
SDHB-204ENST00000475049 DLEC1Q9Y238 1755 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SERTM2A0A1B0GWG4 89 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 NCBP2LA6PVI3 153 aaKnown RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 H7C1H1 209 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 M0R3G1 203 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CASQ2O14958 399 aaPredicted RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 SMIM24O75264 130 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SEMA3DO95025 777 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CD160O95971 181 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CLTAP09496 248 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CD37P11049 281 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 NBL1P41271 181 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 RBM34P42696 430 aaKnown RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 SLC1A2P43004 574 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SLC11A1P49279 550 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 RAB9AP51151 201 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SYNJ2BPP57105 145 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 PITPNAQ00169 270 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SEMG2Q02383 582 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 ILKQ13418 452 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CASP8Q14790 479 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CHRFAM7AQ494W8 412 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 MPV17L2Q567V2 206 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 AVPI1Q5T686 147 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 CSGALNACT2Q8N6G5 542 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 BBOF1Q8ND07 529 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 OR8K1Q8NGG5 319 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.39□□□□□ -2.03
SDHB-204ENST00000475049 ZNF488Q96MN9 340 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 ZNF317Q96PQ6 595 aaPredicted RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 OR52D1Q9H346 318 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SLC38A10Q9HBR0 1119 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 MYOZ1Q9NP98 299 aaPredicted RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 ACP6Q9NPH0 428 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 SLC39A1Q9NY26 324 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 COL5A3P25940 1745 aaPredicted RBP2.39□□□□□ -2.03
SDHB-204ENST00000475049 KMT2EQ8IZD2 1858 aa2.39□□□□□ -2.03
SDHB-204ENST00000475049 UBR5O95071 2799 aaPredicted RBP2.38□□□□□ -2.03
SDHB-204ENST00000475049 CPDO75976 1380 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 EP300Q09472 2414 aaPredicted RBP2.38□□□□□ -2.03
SDHB-204ENST00000475049 TRAV40A0A0B4J280 105 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 IGHV1OR15-9A0A0B4J2B8 117 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 A0A0U1RQV1 116 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 SERPINE3A8MV23 424 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 BPY2O14599 106 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 BIRC5O15392 142 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CHST10O43529 356 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 REM1O75628 298 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CCNKO75909 580 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 SLC22A5O76082 557 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 HLA-DQA1P01909 254 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CTSLP07711 333 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 OR8U9P0C7N5 309 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ZNF688P0C7X2 276 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CCL5P13501 91 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ANXA8P13928 327 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 GSTM3P21266 225 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 SYT1P21579 422 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ALDH3A1P30838 453 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 TALDO1P37837 337 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 OPRK1P41145 380 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 RANBP1P43487 201 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 KIR3DL2P43630 455 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 GNG11P61952 73 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 PRR3P79522 188 aaKnown RBP2.38□□□□□ -2.03
SDHB-204ENST00000475049 CDK5Q00535 292 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 MOBPQ13875 183 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 KIR2DS1Q14954 304 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 C1orf185Q5T7R7 199 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ANXA8L1Q5VT79 327 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ADNP2Q6IQ32 1131 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CROCCP2Q86T23 111 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 CDKL3Q8IVW4 592 aaPredicted RBP2.38□□□□□ -2.03
SDHB-204ENST00000475049 RP1L1Q8IWN7 2480 aaPredicted RBP2.38□□□□□ -2.03
SDHB-204ENST00000475049 RNF182Q8N6D2 247 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ZNF615Q8N8J6 731 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 GPR26Q8NDV2 337 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 BPIFCQ8NFQ6 507 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 LILRB4Q8NHJ6 448 aa2.38□□□□□ -2.03
SDHB-204ENST00000475049 ERMNQ8TAM6 284 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms