RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 B9D1Q9UPM9 204 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 SIGLEC9Q9Y336 463 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
NPHP3-206ENST00000474871 IRGMA1A4Y4 181 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 KLK10O43240 276 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RBFOX2O43251 390 aaKnown RBP eCLIP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CDRT1O95170 752 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 GCGP01275 180 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 HLA-HP01893 362 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ANXA2P07355 339 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PSG2P11465 335 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TSNQ15631 228 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 LY6G6FQ5SQ64 297 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 C6orf141Q5SZD1 244 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CPZQ66K79 652 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CBLN3Q6UW01 205 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ENPP7Q6UWV6 458 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OSR2Q8N2R0 312 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 BADQ92934 168 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TSLPQ969D9 159 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SLC35G5Q96KT7 338 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 NDFIP1Q9BT67 221 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 C19orf24Q9BVV8 132 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 REEP1Q9H902 201 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 IL1RL2Q9HB29 575 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TM7SF3Q9NS93 570 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 NTMQ9P121 344 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PLAGL1Q9UM63 463 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 INSL5Q9Y5Q6 135 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 DNAH12Q6ZR08 3092 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 J3QLI3 93 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SLC1A7O00341 560 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 HAND1O96004 215 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TIMP1P01033 207 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FCGR2AP12318 317 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MAKP20794 623 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 GABRA5P31644 462 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 HTR4Q13639 388 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PCOLCEQ15113 449 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF260Q3ZCT1 412 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 WIPI1Q5MNZ9 446 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SAMD4BQ5PRF9 694 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FAM162BQ5T6X4 162 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PDZD9Q8IXQ8 264 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ARHGEF39Q8N4T4 335 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 Q8N976 141 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SMAP2Q8WU79 429 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 NUS1Q96E22 293 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SEH1LQ96EE3 360 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MRPL57Q9BQC6 102 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ST6GALNAC5Q9BVH7 336 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF629Q9UEG4 869 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RAP2CQ9Y3L5 183 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 KIF26AQ9ULI4 1882 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 EFCAB9A8MZ26 197 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TPST1O60507 370 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ESR1P03372 595 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 MANFP55145 182 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RAB25P57735 213 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FOXF1Q12946 379 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PAFAH1B3Q15102 231 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 VAMP3Q15836 100 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SPIN4Q56A73 249 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RSPO2Q6UXX9 243 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CLEC20AQ6ZU45 233 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 RNF44Q7L0R7 432 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 DET1Q7L5Y6 550 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF595Q8IYB9 648 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM251Q8N6I4 163 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OR52E5Q8NH55 327 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OR51Q1Q8NH59 317 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FCGR1BQ92637 280 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FRZBQ92765 325 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SLC35A4Q96G79 324 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PAAF1Q9BRP4 392 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 LMF2Q9BU23 707 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SPRTNQ9H040 489 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 PATZ1Q9HBE1 687 aaKnown RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 BEX1Q9HBH7 125 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 SMCO4Q9NRQ5 59 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF358Q9NW07 568 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FLVCR2Q9UPI3 526 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 HS3ST2Q9Y278 367 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FOXI3A8MTJ6 420 aaPredicted RBP4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FAAHO00519 579 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CHST1O43916 411 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 OR2A4O95047 310 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CER1O95813 267 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF28P17035 718 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 FASP25445 335 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 HTR1FP30939 366 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 ELK3P41970 407 aa4.27□□□□□ -1.73
NPHP3-206ENST00000474871 CXCL12P48061 93 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms