RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DSCAML1Q8TD84 2053 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TRBV5-7A0A0A0MS05 114 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 PNMA8CA0A1B0GUJ8 204 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 A0A1B0GVI7 797 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 PQLC2LA1A4F0 135 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ANKRD61A6NGH8 418 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TRIM64CA6NLI5 447 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM212A6NML5 194 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ANKRD30BLA7E2S9 258 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 MYL12BO14950 172 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 PIN1P1O15428 100 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CD1AP06126 327 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 UBCP0CG48 685 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CELP19835 753 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CRYBB2P43320 205 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CHN2P52757 468 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 GP2P55259 537 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 DEFA6Q01524 100 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 BDH1Q02338 343 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 SLC3A1Q07837 685 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 RIPPLY1Q0D2K3 151 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 MRPL28Q13084 256 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF154Q13106 437 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TPBGQ13641 420 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 OR8G1Q15617 311 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 SSX1Q16384 188 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CLEC12BQ2HXU8 276 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CHRFAM7AQ494W8 412 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZMAT1Q5H9K5 638 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CEP78Q5JTW2 689 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 FAM201AQ5SY85 155 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF529Q6P280 563 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF773Q6PK81 442 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF826PQ6ZT77 177 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 MOGAT3Q86VF5 341 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 COMMD2Q86X83 199 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 PARP16Q8N5Y8 322 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF676Q8N7Q3 588 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 OR5AK2Q8NH90 309 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ZNF420Q8TAQ5 688 aaPredicted RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 PIGCQ92535 297 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 RDH5Q92781 318 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 FGGYQ96C11 551 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 DIRC2Q96SL1 478 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 ADAT1Q9BUB4 502 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 MND1Q9BWT6 205 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CHST5Q9GZS9 411 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CCDC90BQ9GZT6 254 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 SLC22A4Q9H015 551 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TLNRD1Q9H1K6 362 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 SAP30LQ9HAJ7 183 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TRIM36Q9NQ86 728 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 GPR173Q9NS66 373 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 IL19Q9UHD0 177 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 HHLA2Q9UM44 414 aa5.88□□□□□ -1.47
LIMD1-204ENST00000474665 SF3B6Q9Y3B4 125 aaKnown RBP5.88□□□□□ -1.47
LIMD1-204ENST00000474665 TRAV8-7A0A075B6U6 113 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 IGHV4-61A0A0C4DH41 118 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 IGHV1-69-2A0A0G2JMI3 117 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MAGEA13PA6NCF6 341 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM178BH3BS89 294 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MRPS14O60783 128 aaKnown RBP5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MTRF1O75570 445 aaKnown RBP5.87□□□□□ -1.47
LIMD1-204ENST00000474665 SC5DO75845 299 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 INMTO95050 263 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 NRASP01111 189 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 LHBP01229 141 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 SMIM18P0DKX4 95 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 EEF1B2P24534 225 aaKnown RBP5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CFPP27918 469 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 SOX2P48431 317 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 GPM6AP51674 278 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 RPS25P62851 125 aaKnown RBP5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MED22Q15528 200 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CEACAM21Q3KPI0 293 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CLVS2Q5SYC1 327 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 FAM27D1Q5T7N8 215 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 UBE2UQ5VVX9 321 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 LIPKQ5VXJ0 399 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 WDR82Q6UXN9 313 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 UNQ9370/PRO34162Q6UXP9 181 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 TMEM91Q6ZNR0 172 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MOB3CQ70IA8 216 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 UTS2BQ765I0 119 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 ZDHHC23Q8IYP9 409 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CELF2-AS1Q8N7Q2 184 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CCDC54Q8NEL0 328 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 OR1M1Q8NGA1 313 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 OR51A2Q8NGJ7 313 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 Q8TCH9 128 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 HAVCR2Q8TDQ0 301 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 FAM168AQ92567 244 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 CCL17Q92583 94 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 RPL3LQ92901 407 aaKnown RBP5.87□□□□□ -1.47
LIMD1-204ENST00000474665 ITFG2Q969R8 447 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 SEH1LQ96EE3 360 aa5.87□□□□□ -1.47
LIMD1-204ENST00000474665 MYCBPQ99417 103 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms