RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 IGFL3Q6UXB1 125 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 P4HA3Q7Z4N8 544 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 CPEB3Q8NE35 698 aaKnown RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 BEST4Q8NFU0 473 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 SCGB3A2Q96PL1 93 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 ZMAT3Q9HA38 289 aaKnown RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 HSF4Q9ULV5 492 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 EP300Q09472 2414 aaPredicted RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 WIPF3A6NGB9 483 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 TPD52L2O43399 206 aaKnown RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 RGS11O94810 467 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 IGHV3-9P01782 118 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 PATE4P0C8F1 98 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 GSTT2P0CG29 244 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 TAS2R46P59540 309 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 ZNF92Q03936 586 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 CAMK2BQ13554 666 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 OR1K1Q8NGR3 316 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 OR2AE1Q8NHA4 323 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 ZNF431Q8TF32 576 aaPredicted RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 SNAPC3Q92966 411 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 TMEM246Q9BRR3 403 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 NICN1Q9BSH3 213 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 REPIN1Q9BWE0 567 aaKnown RBP18.9■□□□□ 0.62
CCM2-206ENST00000474617 DLL4Q9NR61 685 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 GPR173Q9NS66 373 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 B3GNT2Q9NY97 397 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 CLCF1Q9UBD9 225 aa18.9■□□□□ 0.62
CCM2-206ENST00000474617 A0A0A6YYD4 124 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 OR14I1A6ND48 311 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 H3BUI4 141 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 ATP6V1G1O75348 118 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 OR2A4O95047 310 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 CSTBP04080 98 aaKnown RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 TMEM225BP0DP42 221 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 CXCL3P19876 107 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 UBE2MP61081 183 aaKnown RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 RSU1Q15404 277 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 PLAC9Q5JTB6 97 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 NUFIP2Q7Z417 695 aaKnown RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 TMEM17Q86X19 198 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 ZADH2Q8N4Q0 377 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 OR5L1Q8NGL2 311 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 DVL3Q92997 716 aaPredicted RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 CMBLQ96DG6 245 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 OR2A7Q96R45 310 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 TINAGL1Q9GZM7 467 aaPredicted RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 BANF2Q9H503 90 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 MGAT4CQ9UBM8 478 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 EIF3KQ9UBQ5 218 aaKnown RBP18.89■□□□□ 0.61
CCM2-206ENST00000474617 KCNK7Q9Y2U2 307 aa18.89■□□□□ 0.61
CCM2-206ENST00000474617 PROB1E7EW31 1015 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 SOCS1O15524 211 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 EDN3P14138 238 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 PMELP40967 661 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 RAB1AP62820 205 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 OR2A2Q6IF42 318 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 LPCAT3Q6P1A2 487 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 NUDCD2Q8WVJ2 157 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 ST8SIA4Q92187 359 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 BOD1Q96IK1 185 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 Q96M66 194 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 SEC22CQ9BRL7 303 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 EDARQ9UNE0 448 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 KCNMB2Q9Y691 235 aa18.88■□□□□ 0.61
CCM2-206ENST00000474617 SSX5O60225 188 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 CST4P01036 141 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 FCER2P06734 321 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 CD79AP11912 226 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 APLNRP35414 380 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 TMEM50BP56557 158 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 TAS2R31P59538 309 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 CXADRP78310 365 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 ARFRP1Q13795 201 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 HOGA1Q86XE5 327 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 SAXO1Q8IYX7 474 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 OR4K15Q8NH41 348 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 BCL2L2Q92843 193 aaPredicted RBP18.87■□□□□ 0.61
CCM2-206ENST00000474617 ARHGAP5-AS1Q96IT6 56 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 POM121L2Q96KW2 1035 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 BEX1Q9HBH7 125 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 PLSCR2Q9NRY7 297 aa18.87■□□□□ 0.61
CCM2-206ENST00000474617 M0QYG6 137 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 HLA-HP01893 362 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 VSIG10L2P0DP72 767 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 SERPINA2P20848 420 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 DNASE1P24855 282 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 BLVRBP30043 206 aaPredicted RBP18.86■□□□□ 0.61
CCM2-206ENST00000474617 ECI1P42126 302 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 DEFB109BQ30KR1 87 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 C4orf46Q504U0 113 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 MRPL21Q7Z2W9 205 aaKnown RBP18.86■□□□□ 0.61
CCM2-206ENST00000474617 NPRL2Q8WTW4 380 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 WNT2BQ93097 391 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 SLC6A7Q99884 636 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 POFUT1Q9H488 388 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 ELL3Q9HB65 397 aaPredicted RBP18.86■□□□□ 0.61
CCM2-206ENST00000474617 FAM86C1Q9NVL1 165 aa18.86■□□□□ 0.61
CCM2-206ENST00000474617 LOC100509620A0A075B734 347 aa18.85■□□□□ 0.61
CCM2-206ENST00000474617 A0A096LPE4 126 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms