RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 DMRTB1Q96MA1 342 aa15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 YIPF3Q9GZM5 350 aa15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 DNTTIP1Q9H147 329 aa15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 BEX1Q9HBH7 125 aa15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 DNAJB11Q9UBS4 358 aa15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 PRKDCP78527 4128 aaKnown RBP15.45■□□□□ 0.06
CCDC88B-206ENST00000473405 A0A0U1RQV5 110 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 A0A1B0GUS0 222 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 PSMD9O00233 223 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 GYG2O15488 501 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 KCNAB3O43448 404 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 KNG1P01042 644 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 MRPL3P09001 348 aaKnown RBP15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 GPM6AP51674 278 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 DLX1P56177 255 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 RPL15P61313 204 aaKnown RBP15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 PRB3Q04118 309 aaPredicted RBP15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 DGUOKQ16854 277 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 DNAL1Q4LDG9 190 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 LRRC10Q5BKY1 277 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 FAHD1Q6P587 224 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 METAP1DQ6UB28 335 aaPredicted RBP15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 KCTD8Q6ZWB6 473 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 DYRK2Q92630 601 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 TEAD3Q99594 435 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 SEMA6AQ9H2E6 1030 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 YY1AP1Q9H869 796 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 SIRT7Q9NRC8 400 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 PAPOLBQ9NRJ5 636 aaKnown RBP15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 POMPQ9Y244 141 aa15.44■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNF816-ZNF321PA0A0X1KG74 233 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 NKX6-3A6NJ46 265 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 RNASEK-C17orf49H0YIS7 233 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 GPR137BO60478 399 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 RHBDL1O75783 438 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 IGLV3-1P01715 115 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 CRYBA1P05813 215 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 ROM1Q03395 351 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 OLFML2AQ68BL7 652 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 DEGS2Q6QHC5 323 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 FAM81AQ8TBF8 368 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 TBC1D15Q8TC07 691 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 OR51I2Q9H344 312 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 TVP23BQ9NYZ1 205 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 COPS3Q9UNS2 423 aa15.43■□□□□ 0.06
CCDC88B-206ENST00000473405 TMEM269A0A1B0GVZ9 245 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CLPSL1A2RUU4 121 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 ACOD1A6NK06 481 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 SIGLEC5O15389 551 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 MAP2K3P46734 347 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 DAPP51397 102 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CRISP1P54107 249 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 MFGE8Q08431 387 aaPredicted RBP15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 KLRD1Q13241 179 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 SNAPC1Q16533 368 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CEACAM21Q3KPI0 293 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 DMRTC1Q5HYR2 192 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CEP78Q5JTW2 689 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 KCTD18Q6PI47 426 aaPredicted RBP15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CMTM4Q8IZR5 234 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 DNAJC9Q8WXX5 260 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 H1FXQ92522 213 aaKnown RBP15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 TNFRSF14Q92956 283 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 UTP4Q969X6 686 aaKnown RBP15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 NRBF2Q96F24 287 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 OR8B4Q96RC9 309 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 CITED1Q99966 193 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 TEX12Q9BXU0 123 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 TTTY10Q9BZA0 68 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNRD1Q9P1U0 126 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 NLKQ9UBE8 527 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 SLC25A10Q9UBX3 287 aaPredicted RBP15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNF222Q9UK12 451 aa15.42■□□□□ 0.06
CCDC88B-206ENST00000473405 IGKV1D-17A0A075B6S4 117 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 OR2AT4A6NND4 320 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 M0R129 80 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 PRKYO43930 277 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 ACAA1P09110 424 aaPredicted RBP15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 KRTAP10-3P60369 221 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 GNG3P63215 75 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 PTGES3Q15185 160 aaKnown RBP15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 TAF9Q16594 264 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 C17orf107Q6ZR85 190 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNF679Q8IYX0 411 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 OR51E1Q8TCB6 317 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 MED30Q96HR3 178 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 MROQ9BYG7 248 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 PBOV1Q9GZY1 135 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 GPR84Q9NQS5 396 aa15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 NUFIP1Q9UHK0 495 aaKnown RBP15.41■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNF732B4DXR9 585 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 ZNF254O75437 659 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 SRSF10O75494 262 aaKnown RBP15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 DNAJC8O75937 253 aaPredicted RBP15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 FAHP16930 419 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 GLRA1P23415 457 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 CAV3P56539 151 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 LCN1P1Q5VSP4 162 aa15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 BCDIN3DQ7Z5W3 292 aaKnown RBP15.4■□□□□ 0.06
CCDC88B-206ENST00000473405 PNKDQ8N490 385 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms