RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CMTM8Q8IZV2 173 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 TRAM1L1Q8N609 369 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 TM2D3Q9BRN9 247 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 DDX19BQ9UMR2 479 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 OR51B2Q9Y5P1 312 aa2.5□□□□□ -2.01
CLK1-209ENST00000472679 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 ZNF99A8MXY4 864 aaPredicted RBP2.49□□□□□ -2.01
CLK1-209ENST00000472679 KLHL40Q2TBA0 621 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 LINC00336Q6ZUF6 198 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 SFXN5Q8TD22 340 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 SNF8Q96H20 258 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 ZBED3Q96IU2 234 aaPredicted RBP2.49□□□□□ -2.01
CLK1-209ENST00000472679 NAPGQ99747 312 aaPredicted RBP2.49□□□□□ -2.01
CLK1-209ENST00000472679 PDCD1LG2Q9BQ51 273 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 TMEM175Q9BSA9 504 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 C8orf33Q9H7E9 229 aaPredicted RBP2.49□□□□□ -2.01
CLK1-209ENST00000472679 SND1-IT1Q9HBX3 110 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 ZNF492Q9P255 531 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 VAX2Q9UIW0 290 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 CES1P1Q9UKY3 287 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 RAB22AQ9UL26 194 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 PPIL1Q9Y3C6 166 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 R4GN34 69 aa2.49□□□□□ -2.01
CLK1-209ENST00000472679 SLC22A20A6NK97 555 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 C4orf51C9J302 202 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 FARS2O95363 451 aaKnown RBP2.48□□□□□ -2.01
CLK1-209ENST00000472679 PTTG1O95997 202 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 GFAPP14136 432 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 TUBG1P23258 451 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 MPIP34949 423 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 TSC22D1Q15714 1073 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 DEFB134Q4QY38 66 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 HHATQ5VTY9 493 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 NDUFAF7Q7L592 441 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 DAW1Q8N136 415 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 ZCCHC24Q8N2G6 241 aaKnown RBP2.48□□□□□ -2.01
CLK1-209ENST00000472679 WDR31Q8NA23 367 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
CLK1-209ENST00000472679 ISOC2Q96AB3 205 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 SMARCD1Q96GM5 515 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 CSPG4P5Q96PW8 444 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 TUBG2Q9NRH3 451 aa2.48□□□□□ -2.01
CLK1-209ENST00000472679 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 ARPC4-TTLL3A0A0A6YYG9 625 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 TMEM72A0PK05 275 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 H3BN98 237 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 AKR7A2O43488 359 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 IGHV1-46P01743 117 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 HLA-DMAP28067 261 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 PRSS3P35030 304 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 PAFAH1B2P68402 229 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 RPL18AQ02543 176 aaKnown RBP2.47□□□□□ -2.01
CLK1-209ENST00000472679 IHHQ14623 411 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 PDPNQ86YL7 162 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 OR2M7Q8NG81 312 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 OR1S1Q8NH92 325 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 GLYATL2Q8WU03 294 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 ARV1Q9H2C2 271 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 TRIM45Q9H8W5 580 aaPredicted RBP2.47□□□□□ -2.01
CLK1-209ENST00000472679 FANCEQ9HB96 536 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 ZNF302Q9NR11 478 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 HMGXB4Q9UGU5 601 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 SIGLEC1Q9BZZ2 1709 aa2.47□□□□□ -2.01
CLK1-209ENST00000472679 HACD1B0YJ81 288 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 MYL12BO14950 172 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 UPK1BO75841 260 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 MAGEA1P43355 309 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 CLDN6P56747 220 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 GRB2P62993 217 aaKnown RBP2.46□□□□□ -2.02
CLK1-209ENST00000472679 FAM104BQ5XKR9 115 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 HCP5Q6MZN7 132 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 WDR59Q6PJI9 974 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 ZNF420Q8TAQ5 688 aaPredicted RBP2.46□□□□□ -2.02
CLK1-209ENST00000472679 GPX8Q8TED1 209 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 NAT6Q93015 286 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 GABRG3Q99928 467 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 OR51B5Q9H339 312 aa2.46□□□□□ -2.02
CLK1-209ENST00000472679 PRR14LQ5THK1 2151 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 GOLGA8JA6NMD2 632 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 HSBP1O75506 76 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 NRASP01111 189 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 HRASP01112 189 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 KRASP01116 189 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 GOLGA8HP0CJ92 632 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 TAS2R39P59534 338 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 TPRG1LQ5T0D9 272 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 PLCXD3Q63HM9 321 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 ANGPTL8Q6UXH0 198 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 NT5DC3Q86UY8 548 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 Q96MT0 163 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 DERL3Q96Q80 235 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 TBL1XR1Q9BZK7 514 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 IQCGQ9H095 443 aaKnown RBP2.45□□□□□ -2.02
CLK1-209ENST00000472679 OR2AG1Q9H205 316 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 CLSTN2Q9H4D0 955 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 TAS2R1Q9NYW7 299 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 ADA2Q9NZK5 511 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 RHBDD3Q9Y3P4 386 aa2.45□□□□□ -2.02
CLK1-209ENST00000472679 TRAV8-6A0A0B4J262 113 aa2.44□□□□□ -2.02
CLK1-209ENST00000472679 A0A0G2JMP0 313 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms