RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CENPAP49450 140 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 SUMO2P61956 95 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 TRAP1Q12931 704 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 DGCR6Q14129 220 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 GK2Q14410 553 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 KRT72Q14CN4 511 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 HERPUD1Q15011 391 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 IFI44LQ53G44 452 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 LRRC10Q5BKY1 277 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 MESTQ5EB52 335 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 FGD3Q5JSP0 725 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 BEND6Q5SZJ8 279 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 KPRPQ5T749 579 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 ASPHD1Q5U4P2 390 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 AGBL2Q5U5Z8 902 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR2T2Q6IF00 324 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 DRAM2Q6UX65 266 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 Q6ZR03 302 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 C1orf122Q6ZSJ8 110 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 RBM45Q8IUH3 476 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 NKAIN4Q8IVV8 208 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR5AS1Q8N127 324 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 C10orf111Q8N326 155 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 LINC00471Q8N535 108 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 FAM86B1Q8N7N1 296 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 ZSCAN4Q8NAM6 433 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 CYB561A3Q8NBI2 242 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 BHLHE23Q8NDY6 225 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 CSNK2A3Q8NEV1 391 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR4F17Q8NGA8 305 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR52L1Q8NGH7 329 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR52H1Q8NGJ2 320 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR5D13Q8NGL4 314 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR8S1Q8NH09 359 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR51A7Q8NH64 312 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 MOSPD2Q8NHP6 518 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 LINC01006Q8NI28 216 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 FANK1Q8TC84 345 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 C10orf82Q8WW14 230 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 TLCD1Q96CP7 247 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 ZNF799Q96GE5 643 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 RSRC1Q96IZ7 334 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 OR4F4Q96R69 305 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 PITX2Q99697 317 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 EBF4Q9BQW3 602 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 C1QTNF5Q9BXJ0 243 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 CDCA4Q9BXL8 241 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 NPFFR1Q9GZQ6 430 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 NSRP1Q9H0G5 558 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 SYT4Q9H2B2 425 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 RGCCQ9H4X1 137 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 METTL8Q9H825 291 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 RNPEPL1Q9HAU8 725 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 NECAP2Q9NVZ3 263 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 PTTG3PQ9NZH4 202 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 PDP1Q9P0J1 537 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 ZNRD1Q9P1U0 126 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 KAAG1Q9UBP8 84 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 NKX1-2Q9UD57 310 aaPredicted RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 ZMAT5Q9UDW3 170 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 STEAP1Q9UHE8 339 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 ZNF391Q9UJN7 358 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 PITPNC1Q9UKF7 332 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 PRPF19Q9UMS4 504 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 A4GNTQ9UNA3 340 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 SAMD4AQ9UPU9 718 aaKnown RBP2.88□□□□□ -1.95
XRN1-209ENST00000472625 LRP12Q9Y561 859 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 SNX13Q9Y5W8 968 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 CAPN7Q9Y6W3 813 aa2.88□□□□□ -1.95
XRN1-209ENST00000472625 DNAH3Q8TD57 4116 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 NOTCH1P46531 2555 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 IGKV1D-43A0A0B4J1Z2 117 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 A0A1W2PQ09 198 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 GGT3PA6NGU5 568 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 TMEM210A6NLX4 147 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 CD300LBA8K4G0 201 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 ZNF878C9JN71 531 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 F5H5K5 113 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 H7C1C5 153 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 PRYO14603 147 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 NPFFO15130 113 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 ARPC3O15145 178 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 RER1O15258 196 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 MLNRO43193 412 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 NDUFB3O43676 98 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 INMTO95050 263 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 DUS4LO95620 317 aaKnown RBP2.87□□□□□ -1.95
XRN1-209ENST00000472625 PPP1R3DO95685 299 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 ZNF682O95780 498 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 TXNDC12O95881 172 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 IGHV4-59P01825 116 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 HLA-DQA2P01906 255 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 LCATP04180 440 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 H1F0P07305 194 aaKnown RBP2.87□□□□□ -1.95
XRN1-209ENST00000472625 MMP9P14780 707 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 TNFRSF1BP20333 461 aa2.87□□□□□ -1.95
XRN1-209ENST00000472625 MDH1P40925 334 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms