RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 REEP6Q96HR9 211 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 FOXB1Q99853 325 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 GSX2Q9BZM3 304 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 WNT5BQ9H1J7 359 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 ZNF107Q9UII5 783 aaPredicted RBP13.1□□□□□ -0.31
UBXN11-213ENST00000472155 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
UBXN11-213ENST00000472155 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
UBXN11-213ENST00000472155 OR5H14A6NHG9 310 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 GJE1A6NN92 205 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 CHRM2P08172 466 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 CCL2P13500 99 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 THBS4P35443 961 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 HTR5AP47898 357 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 OR1F12Q8NHA8 337 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 WBP1Q96G27 269 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 SF3B5Q9BWJ5 86 aaKnown RBP13.09□□□□□ -0.31
UBXN11-213ENST00000472155 STRADBQ9C0K7 418 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 MFFQ9GZY8 342 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 SLC6A15Q9H2J7 730 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 C5orf66Q9H5L9 145 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 HMSDA8MTL9 139 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 MPTX1A8MV57 137 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 I3L521 148 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 NR2C1P13056 603 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 MAGEA5P43359 124 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 NKAPLQ5M9Q1 402 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 HOGA1Q86XE5 327 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 FAM89BQ8N5H3 189 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 BHLHE23Q8NDY6 225 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 OR2M7Q8NG81 312 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 OR56B1Q8NGI3 324 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 OR13G1Q8NGZ3 307 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 KCNE4Q8WWG9 221 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 HAS2Q92819 552 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 PECRQ9BY49 303 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 RDH8Q9NYR8 311 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 SHANK1Q9Y566 2161 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 A0A096LPE4 126 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 A0A1W2PPZ6 126 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 OR6C65A6NJZ3 312 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 EEF1E1-BLOC1S5C9J1V9 151 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 CNR1P21554 472 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 ITGA3P26006 1051 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 ZNF92Q03936 586 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 MPPED2Q15777 294 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 SULF2Q8IWU5 870 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 RELL2Q8NC24 303 aaPredicted RBP13.09□□□□□ -0.31
UBXN11-213ENST00000472155 CPEB3Q8NE35 698 aaKnown RBP13.09□□□□□ -0.31
UBXN11-213ENST00000472155 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 PDCD10Q9BUL8 212 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 GPR35Q9HC97 309 aa13.09□□□□□ -0.31
UBXN11-213ENST00000472155 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 RLN2P04090 185 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 MTCP1P56278 107 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 RAB35Q15286 201 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 SIGIRRQ6IA17 410 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF546Q86UE3 836 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 MYOZ1Q9NP98 299 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 MGAQ8IWI9 3026 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 IL2RAP01589 272 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 GSTP1P09211 210 aaKnown RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 AMY2BP19961 511 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 GSK3AP49840 483 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 SNU13P55769 128 aaKnown RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 TAF9Q16594 264 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 SLC16A14Q7RTX9 510 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 SEMA6DQ8NFY4 1073 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 TERB2Q8NHR7 220 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 MITD1Q8WV92 249 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF703Q9H7S9 590 aaPredicted RBP13.08□□□□□ -0.32
UBXN11-213ENST00000472155 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
UBXN11-213ENST00000472155 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 IGKV1-12A0A0C4DH73 117 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 OR6C6A6NF89 314 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
UBXN11-213ENST00000472155 ADAP1O75689 374 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 IGKV1D-12P01611 117 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 CST2P09228 141 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 ZNF883P0CG24 379 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 GLRA1P23415 457 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 MPZP25189 248 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 RRADP55042 308 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 ARPC4P59998 168 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 IKZF1Q13422 519 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
UBXN11-213ENST00000472155 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms