RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NOX4Q9NPH5 578 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 TRIM36Q9NQ86 728 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 C14orf119Q9NWQ9 140 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 FAM206AQ9NX38 181 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 TVP23BQ9NYZ1 205 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 ZNF222Q9UK12 451 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 PRPF19Q9UMS4 504 aaKnown RBP6.61□□□□□ -1.35
USP48-207ENST00000471752 BAIAP2Q9UQB8 552 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 MMP24Q9Y5R2 645 aa6.61□□□□□ -1.35
USP48-207ENST00000471752 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 A0A1B0GTI1 187 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 CLPSL1A2RUU4 121 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 NDUFA2O43678 99 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 FKBP6O75344 327 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SRSF10O75494 262 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 TIPRLO75663 272 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 INMTO95050 263 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 CST4P01036 141 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 KNG1P01042 644 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 ACAA1P09110 424 aaPredicted RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 MUC1P15941 1255 aaPredicted RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 FAHP16930 419 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 CALB2P22676 271 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 DDOSTP39656 456 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SLC15A1P46059 708 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 MNAT1P51948 309 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 PROK1P58294 105 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 CBX1P83916 185 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 EFNB1P98172 346 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 MIDNQ504T8 468 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 LDLRAD2Q5SZI1 272 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 KCTD8Q6ZWB6 473 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 MOB3CQ70IA8 216 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SHFQ7M4L6 423 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SSX6Q7RTT6 188 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 RNF144BQ7Z419 303 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SPATA24Q86W54 205 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 C1QL4Q86Z23 238 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 DYNAPQ8N1N2 210 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 C11orf42Q8N5U0 333 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 H1FXQ92522 213 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 UTP4Q969X6 686 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 DUS3LQ96G46 650 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 FAM71F1Q96KD3 344 aaPredicted RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 CADM1Q9BY67 442 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 PBOV1Q9GZY1 135 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SLITRK2Q9H156 845 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 TOR3AQ9H497 397 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 ZMAT3Q9HA38 289 aaKnown RBP6.6□□□□□ -1.35
USP48-207ENST00000471752 GPR84Q9NQS5 396 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 C19orf12Q9NSK7 152 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 NDE1Q9NXR1 346 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 SLC22A13Q9Y226 551 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 POMPQ9Y244 141 aa6.6□□□□□ -1.35
USP48-207ENST00000471752 ZNF816-ZNF321PA0A0X1KG74 233 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 TMEM269A0A1B0GVZ9 245 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 TCRBV3S1A0A5B6 114 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 AQP12BA6NM10 295 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 OR2AT4A6NND4 320 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 GNGT2O14610 69 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 NDUFB3O43676 98 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 NDUFA7O95182 113 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 APOL3O95236 402 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 TSPAN15O95858 294 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 FAM107AO95990 144 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 IGLV3-1P01715 115 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 LIPFP07098 398 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 NDUFB7P17568 137 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 GNALP38405 381 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 GABRA2P47869 451 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 RAB13P51153 203 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 CRISP1P54107 249 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 RPS7P62081 194 aaKnown RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 PDCD1Q15116 288 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 PTGES3Q15185 160 aaKnown RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 SNAPC1Q16533 368 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 LY6EQ16553 131 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 SLC35E4Q6ICL7 350 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 FAHD1Q6P587 224 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 ANGPTL5Q86XS5 388 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 AQP12AQ8IXF9 295 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 MKXQ8IYA7 352 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 ARHGAP24Q8N264 748 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 C11orf44Q8N8P7 122 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 ZSCAN4Q8NAM6 433 aaPredicted RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 PAPD5Q8NDF8 572 aaKnown RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 OR4M1Q8NGD0 313 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 OR52H1Q8NGJ2 320 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 FAM110DQ8TAY7 271 aaPredicted RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 PIFOQ8TCI5 191 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 SSMEM1Q8WWF3 244 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 AQP3Q92482 292 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 UBE2FQ969M7 185 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 LRGUKQ96M69 825 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 MICU1Q9BPX6 476 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 RBM4BQ9BQ04 359 aaKnown RBP6.59□□□□□ -1.35
USP48-207ENST00000471752 MUC13Q9H3R2 512 aa6.59□□□□□ -1.35
USP48-207ENST00000471752 BEX1Q9HBH7 125 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms