RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 POC5Q8NA72 575 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 BHLHE23Q8NDY6 225 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 OR10S1Q8NGN2 331 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 Q8TCH9 128 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 SPRYD4Q8WW59 207 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-211ENST00000471260 RFKQ969G6 155 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 NMNAT2Q9BZQ4 307 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 WDR76Q9H967 626 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 TMEM165Q9HC07 324 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 MIOXQ9UGB7 285 aa11.33□□□□□ -0.6
HMGN1-211ENST00000471260 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 FBN3Q75N90 2809 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 CEACAM18A8MTB9 384 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 F5H5P2 479 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 H0YL77 283 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 GMDSO60547 372 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 TRAPPC2P0DI81 140 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 TRAPPC2BP0DI82 140 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 IRF2P14316 349 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF3P17036 446 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 SPI1P17947 270 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.6
HMGN1-211ENST00000471260 ACSM1Q08AH1 577 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 DBPQ10586 325 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF154Q13106 437 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 MAB21L1Q13394 359 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 CRMP1Q14194 572 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 RHOUQ7L0Q8 258 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 DCXRQ7Z4W1 244 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 AKAP14Q86UN6 197 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 NAA40Q86UY6 237 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 TCEANCQ8N8B7 351 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 FAM216AQ8WUB2 273 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 KCNJ15Q99712 375 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-211ENST00000471260 CMC2Q9NRP2 79 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 DNAJC27Q9NZQ0 273 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 OR5V1Q9UGF6 321 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 INSIG2Q9Y5U4 225 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 AUP1Q9Y679 476 aa11.32□□□□□ -0.6
HMGN1-211ENST00000471260 TVP23AA6NH52 213 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 RIIAD1A6NNX1 92 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 CD300LBA8K4G0 201 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF593O00488 134 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 XRCC2O43543 280 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 GPX5O75715 221 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 SOX14O95416 240 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 PTBP3O95758 552 aaKnown RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 APOC1P02654 83 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 HLA-DPB1P04440 258 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 PPIAL4GP0DN37 164 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 FGF9P31371 208 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 TGFBR1P36897 503 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 DDOSTP39656 456 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 GRB2P62993 217 aaKnown RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 BDH1Q02338 343 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 MZT1Q08AG7 82 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 TPBGQ13641 420 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 TAF13Q15543 124 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 OR8G1Q15617 311 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 MOGAT3Q86VF5 341 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 KLBQ86Z14 1044 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 SPERTQ8NA61 448 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 OR51L1Q8NGJ5 315 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 OR52I1Q8NGK6 324 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 OR11L1Q8NGX0 322 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 SLAMF6Q96DU3 332 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 IL4I1Q96RQ9 567 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 MMP26Q9NRE1 261 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 MRPL15Q9P015 296 aaKnown RBP11.31□□□□□ -0.6
HMGN1-211ENST00000471260 PPIAL4AQ9Y536 164 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 ANK2Q01484 3957 aa11.31□□□□□ -0.6
HMGN1-211ENST00000471260 M0R129 80 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 HAX1O00165 279 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 CYB5R3P00387 301 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 SPARCP09486 303 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 RPS2P15880 293 aaKnown RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 GABRA5P31644 462 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 RPS27P42677 84 aaKnown RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 COMPP49747 757 aaPredicted RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 SEC61A1P61619 476 aaKnown RBP11.3□□□□□ -0.6
HMGN1-211ENST00000471260 GNB2P62879 340 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 ZNF92Q03936 586 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 PAX8Q06710 450 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 GINS1Q14691 196 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 KCNJ8Q15842 424 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
HMGN1-211ENST00000471260 LINC01590Q5TEZ4 76 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms