RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MYO9BQ13459 2157 aa3.76□□□□□ -1.81
VPS50-210ENST00000471188 KIF26BQ2KJY2 2108 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 PLXNB2O15031 1838 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DNAJC25-GNG10A0A024R161 153 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TRBV5-5A0A0J9YX44 114 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 C17orf102A2RUQ5 167 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZFP92A6NM28 416 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 M0QZ24 198 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SOX1O00570 391 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 COCHO43405 550 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 UPK3AO75631 287 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR2J2O76002 312 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 AGR2O95994 175 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 IL6RP08887 468 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 SRP19P09132 144 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 GLI4P10075 376 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 CCKARP32238 428 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SLC25A1P53007 311 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 KLF3P57682 345 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 ARFRP1Q13795 201 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 FZD2Q14332 565 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 MMDQ15546 238 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ADIRFQ15847 76 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM164Q5U3C3 297 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SHISA2Q6UWI4 295 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DLK2Q6UY11 383 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 LINC00114Q6XXX2 140 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMPRSS7Q7RTY8 843 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 NUP54Q7Z3B4 507 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DCXRQ7Z4W1 244 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR4N5Q8IXE1 308 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM156Q8N614 296 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 EXD3Q8N9H8 876 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 POC1AQ8NBT0 407 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR51A2Q8NGJ7 313 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SLC35E1Q96K37 410 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 LYSMD1Q96S90 227 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TXN2Q99757 166 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 GPR62Q9BZJ7 368 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 B3GAT1Q9P2W7 334 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 RBPJLQ9UBG7 517 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SH3BGRL2Q9UJC5 107 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 RNF150Q9ULK6 438 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 CHTOPQ9Y3Y2 248 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 MRPS18BQ9Y676 258 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 FAM230AA0A1W2PPH8 454 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM238C9JI98 176 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR5G3P0C626 314 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 CTSAP10619 480 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 HOXB4P17483 251 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 AMY2BP19961 511 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 APOBEC1P41238 236 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 HIST1H3AP68431 136 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SMAD3P84022 425 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 VGLL4Q14135 290 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ENDOGQ14249 297 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 WDR38Q5JTN6 314 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 FBXO42Q6P3S6 717 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TMEM64Q6YI46 380 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 Q6ZVH6 145 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 COX15Q7KZN9 410 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 HSD11B1LQ7Z5J1 315 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 GBGT1Q8N5D6 347 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 IL22RA1Q8N6P7 574 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DCAF4L2Q8NA75 395 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 NPEPL1Q8NDH3 523 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 RCBTB1Q8NDN9 531 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR5AR1Q8NGP9 310 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR5H2Q8NGV7 314 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DYRK2Q92630 601 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SCGB3A2Q96PL1 93 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 MIEN1Q9BRT3 115 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF2Q9BSG1 426 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 VAMP8Q9BV40 100 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ST6GALNAC5Q9BVH7 336 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ELOVL3Q9HB03 270 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 GNG13Q9P2W3 67 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ICAM5Q9UMF0 924 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 MRPS2Q9Y399 296 aaKnown RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 MPDZO75970 2070 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 DOCK11Q5JSL3 2073 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 A0A1B0GWA3 101 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 A0A1W2PR48 441 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 NKX6-3A6NJ46 265 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SLC33A1O00400 549 aaPredicted RBP3.75□□□□□ -1.81
VPS50-210ENST00000471188 ZNF264O43296 627 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OR6A2O95222 327 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OPN1MWP04001 364 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 UMODP07911 640 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OPN1MW2P0DN77 364 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 OPN1MW3P0DN78 364 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 IGFBP4P22692 258 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 CD52P31358 61 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 P2RY1P47900 373 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 SOX8P57073 446 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 ID2Q02363 134 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 TLE1Q04724 770 aa3.75□□□□□ -1.81
VPS50-210ENST00000471188 MEP1BQ16820 701 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms