RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 GLCEO94923 617 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 LYNP07948 512 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 ADH4P08319 380 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 MRPL3P09001 348 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 PPIAL4GP0DN37 164 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 CFL1P23528 166 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 MDH2P40926 338 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 RPL15P61313 204 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 BNIP1Q12981 228 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 MRPL28Q13084 256 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 GK2Q14410 553 aaPredicted RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 ATP6AP1Q15904 470 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 GLYATL3Q5SZD4 288 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 ZBTB37Q5TC79 503 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 CD300LDQ6UXZ3 194 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 FAM57BQ71RH2 274 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 DPY19L4Q7Z388 723 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 MOGAT3Q86VF5 341 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 ZNF454Q8N9F8 522 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 OR4S1Q8NGB4 309 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 OR56B2PQ8NGI1 322 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 OR2AE1Q8NHA4 323 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 OR5K1Q8NHB7 308 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 THEM6Q8WUY1 208 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 SSMEM1Q8WWF3 244 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 SLC7A6OSQ96CW6 309 aaPredicted RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 HAVCR1Q96D42 359 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 PGAM5Q96HS1 289 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 MEGF10Q96KG7 1140 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 KCNJ15Q99712 375 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 PAPOLGQ9BWT3 736 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 CADM1Q9BY67 442 aaKnown RBP4.82□□□□□ -1.64
VARS-222ENST00000470953 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 SLC22A4Q9H015 551 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 RIBC2Q9H4K1 309 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 UFSP2Q9NUQ7 469 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 TVP23BQ9NYZ1 205 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 IL19Q9UHD0 177 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 LAMP5Q9UJQ1 280 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 IKZF2Q9UKS7 526 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 GTF2A1LQ9UNN4 478 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 AP4S1Q9Y587 144 aa4.82□□□□□ -1.64
VARS-222ENST00000470953 SAC3D1A6NKF1 404 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ANXA2P2A6NMY6 339 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CD300LBA8K4G0 201 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ADARB2-AS1A8MUL3 147 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 A8MXK9 166 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 PFDN1O60925 122 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CYB5R3P00387 301 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 IGHV2-70P01814 119 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 HLA-DPB1P04440 258 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CD33P20138 364 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 PRKACGP22612 351 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CA6P23280 308 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ATP6V1E1P36543 226 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 IER3P46695 156 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CRISP1P54107 249 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ZNF121P58317 390 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 PSMA6P60900 246 aaKnown RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 B2MP61769 119 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ESRRGP62508 458 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 GNB2P62879 340 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 HIST1H3AP68431 136 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 DCTN2Q13561 401 aaKnown RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 APOFQ13790 326 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 OR8B8Q15620 311 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 KCNJ8Q15842 424 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ZNF829Q3KNS6 432 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 SNAI3Q3KNW1 292 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 TMEM255AQ5JRV8 349 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 SLC35D3Q5M8T2 416 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 HIST2H3PS2Q5TEC6 136 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 TMEM236Q5W0B7 351 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 SLC35E4Q6ICL7 350 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 KCTD18Q6PI47 426 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 BTNL3Q6UXE8 466 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 Q6ZR03 302 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 C1orf122Q6ZSJ8 110 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 KCTD8Q6ZWB6 473 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 HIST2H3AQ71DI3 136 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 TMEM179BQ7Z7N9 219 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CPOQ8IVL8 374 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 WFDC9Q8NEX5 89 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 OR8B3Q8NGG8 313 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 OR52H1Q8NGJ2 320 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 ZNF420Q8TAQ5 688 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 R3HDM4Q96D70 268 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 REEP6Q96HR9 211 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 FAM71F1Q96KD3 344 aaPredicted RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 TECTBQ96PL2 329 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 OR8B2Q96RD0 313 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CITED4Q96RK1 184 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 CNN2Q99439 309 aaKnown RBP4.81□□□□□ -1.64
VARS-222ENST00000470953 ABHD6Q9BV23 337 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 TTTY10Q9BZA0 68 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 VCXQ9H320 206 aa4.81□□□□□ -1.64
VARS-222ENST00000470953 PATZ1Q9HBE1 687 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms