RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CRIP3Q6Q6R5 217 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 OR2W3Q7Z3T1 314 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 ANGPTL5Q86XS5 388 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 OR8G5Q8NG78 346 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 SYNPRQ8TBG9 265 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 OR5P3Q8WZ94 311 aa12.96□□□□□ -0.33
COL4A5-203ENST00000470339 RALYQ9UKM9 306 aaKnown RBP12.96□□□□□ -0.33
COL4A5-203ENST00000470339 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 TUBAL3A6NHL2 446 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FAM25AB3EWG3 89 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FAM25CB3EWG5 89 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FAM25GB3EWG6 89 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 C1QL1O75973 258 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 IGHV3-13P01766 116 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 PRB1P04280 392 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 EIF4EP06730 217 aaKnown RBP12.95□□□□□ -0.34
COL4A5-203ENST00000470339 MPV17P39210 176 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FABP6P51161 128 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 BSPH1Q075Z2 132 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 FAM189A2Q15884 450 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 CNIH2Q6PI25 160 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 BAIAP2L2Q6UXY1 529 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
COL4A5-203ENST00000470339 TMEM171Q8WVE6 324 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 BORCS5Q969J3 196 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 ITPKCQ96DU7 683 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 S100A16Q96FQ6 103 aaKnown RBP12.95□□□□□ -0.34
COL4A5-203ENST00000470339 SPACA5Q96QH8 159 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 RAB22AQ9UL26 194 aa12.95□□□□□ -0.34
COL4A5-203ENST00000470339 MRPS28Q9Y2Q9 187 aaKnown RBP12.95□□□□□ -0.34
COL4A5-203ENST00000470339 PLCE1Q9P212 2302 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 IGLV3-9A0A075B6K5 115 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 TMEM272A0A1B0GTI8 110 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 FAM230AA0A1W2PPH8 454 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 VSTM5A8MXK1 200 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 ABCD4O14678 606 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 TIMM8AO60220 97 aaPredicted RBP12.94□□□□□ -0.34
COL4A5-203ENST00000470339 CA6P23280 308 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
COL4A5-203ENST00000470339 NR4A2P43354 598 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 SELENOVP59797 346 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 ZP1P60852 638 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 GNG3P63215 75 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 QRFPP83859 136 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 GPR176Q14439 515 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 AWAT2Q6E213 333 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 GLIPR1L1Q6UWM5 242 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 CDH24Q86UP0 819 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 SAXO1Q8IYX7 474 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 CMTM4Q8IZR5 234 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 SPERTQ8NA61 448 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 KCNG3Q8TAE7 436 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 NPRL2Q8WTW4 380 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 MICU1Q9BPX6 476 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 PPP1R3EQ9H7J1 279 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 PALMDQ9NP74 551 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 RHBDL2Q9NX52 303 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 V9GYH0 126 aa12.94□□□□□ -0.34
COL4A5-203ENST00000470339 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
COL4A5-203ENST00000470339 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
COL4A5-203ENST00000470339 IGKV1-27A0A075B6S5 117 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 A0A0A6YYH2 397 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 A6NJ64 397 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 TMEM14DPA8MWL7 114 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 LILRA1O75019 489 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-203ENST00000470339 OR3A4PP47883 348 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 KLF3P57682 345 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-203ENST00000470339 PDZK1IP1Q13113 114 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 BEX5Q5H9J7 111 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 FAM76BQ5HYJ3 339 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 SLC22A25Q6T423 547 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 FAM131AQ6UXB0 335 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 RNF144BQ7Z419 303 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 ZNF573Q86YE8 665 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 OR4M1Q8NGD0 313 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 OR13G1Q8NGZ3 307 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 LINC01560Q8TB33 94 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 C15orf40Q8WUR7 153 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 TNFAIP8L1Q8WVP5 186 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 RNF170Q96K19 258 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 C1orf147Q96MC9 270 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-203ENST00000470339 S100A13Q99584 98 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 RTL8AQ9BWD3 113 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 PCDHB16Q9NRJ7 776 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 CRIM1Q9NZV1 1036 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 EXTL2Q9UBQ6 330 aa12.93□□□□□ -0.34
COL4A5-203ENST00000470339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-203ENST00000470339 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms