RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ARPC4-TTLL3A0A0A6YYG9 625 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 IGHV1-18A0A0C4DH31 117 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 A0A1B0GVI7 797 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SMIM30A4D0T7 59 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 GGT3PA6NGU5 568 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ACOD1A6NK06 481 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR4C45A6NMZ5 311 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SYT7O43581 403 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 PLPP2O43688 288 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 LMX1BO60663 402 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 GPX5O75715 221 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 CDRT1O95170 752 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NGFP01138 241 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 APOC1P02654 83 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ACSM4P0C7M7 580 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NHLRC4P0CG21 123 aaPredicted RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 PSMB1P20618 241 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ANOS1P23352 680 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 PSMA1P25786 263 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 TGFBR2P37173 567 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 WNT5AP41221 380 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SERPINB10P48595 397 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 TGM4P49221 684 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 VBP1P61758 197 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NCS1P62166 190 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 FABP5Q01469 135 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 MXD1Q05195 221 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ACSM1Q08AH1 577 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 MRPL28Q13084 256 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 CDK5R1Q15078 307 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SNAI3Q3KNW1 292 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 CCDC58Q4VC31 144 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DMRTC1Q5HYR2 192 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 TIMM23BQ5SRD1 257 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 GLYATL3Q5SZD4 288 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SPATA46Q5T0L3 261 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ATPAF1Q5TC12 328 aaPredicted RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM244Q5VVB8 128 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DMKNQ6E0U4 476 aaPredicted RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 C22orf42Q6IC83 251 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 XKRXQ6PP77 449 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DRAM2Q6UX65 266 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF704Q6ZNC4 412 aaPredicted RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DPPA2Q7Z7J5 298 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 P2RY8Q86VZ1 359 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF584Q8IVC4 421 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 PHC2Q8IXK0 858 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ELMOD2Q8IZ81 293 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR5AS1Q8N127 324 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 C17orf78Q8N4C9 275 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 MS4A15Q8N5U1 240 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF485Q8NCK3 441 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR8B12Q8NGG6 310 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR1J1Q8NGS3 322 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR13C3Q8NGS6 347 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR10AC1Q8NH08 325 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 OR2AE1Q8NHA4 323 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 ITLN2Q8WWU7 325 aaPredicted RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SGK3Q96BR1 496 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 FGGYQ96C11 551 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 REEP6Q96HR9 211 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 POM121L2Q96KW2 1035 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DOK1Q99704 481 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 CENPOQ9BU64 300 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NIPAL2Q9H841 368 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 SP140LQ9H930 580 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NOX4Q9NPH5 578 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 G6PC2Q9NQR9 355 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 GPR84Q9NQS5 396 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DDX28Q9NUL7 540 aaKnown RBP3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM206AQ9NX38 181 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 NPAP1Q9NZP6 1156 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 FZR1Q9UM11 496 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 STUB1Q9UNE7 303 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DHDHQ9UQ10 334 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 GSTK1Q9Y2Q3 226 aa3.5□□□□□ -1.85
TMEM39A-204ENST00000468545 DSPP15924 2871 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 IGHV2OR16-5A0A0B4J2B6 119 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 A0A1B0GTI1 187 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SMIM31A0A1B0GVY4 71 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 LOC107986453A0A1B0GWG9 222 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TRDV1A0A1B0GX56 115 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A18PA6NE21 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A16PA6NEW6 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 DPRXA6NFQ7 191 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 WIPF3A6NGB9 483 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TUBAL3A6NHL2 446 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TMEM212A6NML5 194 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A9PA6NNJ1 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 FAM90A5PA8MXJ8 464 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 ZNF879B4DU55 563 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 C19orf84I3L1E1 186 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GABRPO00591 440 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 GPRIN2O60269 458 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SRSF10O75494 262 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 RBMXL2O75526 392 aaKnown RBP3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 SERPINA3P01011 423 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 CRYAAP02489 173 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 TTRP02766 147 aa3.49□□□□□ -1.85
TMEM39A-204ENST00000468545 MAS1P04201 325 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms