RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 STUB1Q9UNE7 303 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 FOXJ3Q9UPW0 622 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 IGKV1-9A0A0C4DH69 117 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 IGHV1-69-2A0A0G2JMI3 117 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 LOC100289279A0A1B0GTE1 492 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 ZNF732B4DXR9 585 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 PIN1P1O15428 100 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 MAGEB3O15480 346 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 IGHV4-39P01824 125 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 HPXP02790 462 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 TFAP2AP05549 437 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 UCHL1P09936 223 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 DAOP14920 347 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
SNIP1-202ENST00000468040 AZGP1P25311 298 aaKnown RBP12.88□□□□□ -0.35
SNIP1-202ENST00000468040 GPM6AP51674 278 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 FUT6P51993 359 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 INSL4Q14641 139 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 HSD17B12Q53GQ0 312 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 FAM76BQ5HYJ3 339 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 ZNF573Q86YE8 665 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 OR1M1Q8NGA1 313 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 RDH5Q92781 318 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 SLITRK2Q9H156 845 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 FN3KRPQ9HA64 309 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 TCF7L1Q9HCS4 588 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 TMEM138Q9NPI0 162 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 SSR3Q9UNL2 185 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 PPP1R3CQ9UQK1 317 aa12.88□□□□□ -0.35
SNIP1-202ENST00000468040 AKAP6Q13023 2319 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 A6NLC8 198 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 NDUFS7O75251 213 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 GRPP07492 148 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 HCKP08631 526 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 CSF3P09919 207 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
SNIP1-202ENST00000468040 CRYBB2P43320 205 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 RPL5P46777 297 aaKnown RBP12.87□□□□□ -0.35
SNIP1-202ENST00000468040 ALDH3B2P48448 385 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 RBP2P50120 134 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 ZNF154Q13106 437 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 HFEQ30201 348 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 DMRTC1Q5HYR2 192 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 ASPHD2Q6ICH7 369 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 GPR141Q7Z602 305 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
SNIP1-202ENST00000468040 NPRL2Q8WTW4 380 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 HPS1Q92902 700 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 YIPF6Q96EC8 236 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 FGF23Q9GZV9 251 aaPredicted RBP12.87□□□□□ -0.35
SNIP1-202ENST00000468040 TLNRD1Q9H1K6 362 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 OR51I2Q9H344 312 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 GCM1Q9NP62 436 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 LRBAP50851 2863 aa12.87□□□□□ -0.35
SNIP1-202ENST00000468040 TRAV8-7A0A075B6U6 113 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 ALDOBP05062 364 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 SRMP19623 302 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 GADD45AP24522 165 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 CALRP27797 417 aaKnown RBP12.86□□□□□ -0.35
SNIP1-202ENST00000468040 BDKRB2P30411 391 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 ATP1B3P54709 279 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 MTCP1P56278 107 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 GDPGP1Q6ZNW5 385 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 MOGAT3Q86VF5 341 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 NKAIN3Q8N8D7 197 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 OR51A2Q8NGJ7 313 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 Q8TCH9 128 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 ORAI1Q96D31 301 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 EXOSC4Q9NPD3 245 aaKnown RBP12.86□□□□□ -0.35
SNIP1-202ENST00000468040 CENPEQ02224 2701 aa12.86□□□□□ -0.35
SNIP1-202ENST00000468040 ASH1LQ9NR48 2969 aaKnown RBP12.86□□□□□ -0.35
SNIP1-202ENST00000468040 TRIM64BA6NI03 449 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 J3QT63 122 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 SSX4O60224 188 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 CDC14BO60729 498 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 LY6HO94772 140 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 IRF2P14316 349 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 MYL9P24844 172 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 HAAOP46952 286 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 MPPED2Q15777 294 aa12.85□□□□□ -0.35
SNIP1-202ENST00000468040 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms