RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 DHRS9Q9BPW9 319 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 REPIN1Q9BWE0 567 aaKnown RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 CLEC4MQ9H2X3 399 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 ZNF275Q9NSD4 429 aaPredicted RBP12.67□□□□□ -0.38
DDX56-208ENST00000467318 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
DDX56-208ENST00000467318 DCHS2Q6V1P9 2916 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 CRYBG3Q68DQ2 2970 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 A0A0G2JMP0 313 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 A0A0X1KG70 313 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 IGLV3-1P01715 115 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 ISG15P05161 165 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 EIF4EP06730 217 aaKnown RBP12.66□□□□□ -0.38
DDX56-208ENST00000467318 SSTR2P30874 369 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 ZNF92Q03936 586 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 GLYATL3Q5SZD4 288 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 TMEM244Q5VVB8 128 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 MRPL21Q7Z2W9 205 aaKnown RBP12.66□□□□□ -0.38
DDX56-208ENST00000467318 ZNF295-AS1Q8N0V1 137 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 OR4M2Q8NGB6 313 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 SYNPRQ8TBG9 265 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 PPP1R14AQ96A00 147 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 COMMD4Q9H0A8 199 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 SPATA2Q9UM82 520 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 SLC22A13Q9Y226 551 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 CACNG2Q9Y698 323 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
DDX56-208ENST00000467318 OR4C45A6NMZ5 311 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 HS3ST1O14792 307 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 CTDSPLO15194 276 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 MTRF1O75570 445 aaKnown RBP12.65□□□□□ -0.38
DDX56-208ENST00000467318 SELEP16581 610 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 SLC6A1P30531 599 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 FABP6P51161 128 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 MMP15P51511 669 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 GPR176Q14439 515 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 SPATA46Q5T0L3 261 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 NR2C2APQ86WQ0 139 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 ZNF676Q8N7Q3 588 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 CCDC54Q8NEL0 328 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 OR5AK2Q8NH90 309 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 GRPEL2Q8TAA5 225 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 OR51E1Q8TCB6 317 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 NEUROG1Q92886 237 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 TRIM63Q969Q1 353 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 MRPL24Q96A35 216 aaKnown RBP12.65□□□□□ -0.38
DDX56-208ENST00000467318 HAVCR1Q96D42 359 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 DPAGT1Q9H3H5 408 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 RANGRFQ9HD47 186 aaPredicted RBP12.65□□□□□ -0.38
DDX56-208ENST00000467318 PTTG3PQ9NZH4 202 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 RBMX2Q9Y388 322 aaKnown RBP12.65□□□□□ -0.38
DDX56-208ENST00000467318 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.38
DDX56-208ENST00000467318 ROS1P08922 2347 aa12.65□□□□□ -0.38
DDX56-208ENST00000467318 IGLV3-9A0A075B6K5 115 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 C5orf63A6NC05 138 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 GSTZ1O43708 216 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 ZFPL1O95159 310 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 IGHV3-13P01766 116 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 C1QBP02746 253 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 OR4A8P0C604 315 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 ANOS1P23352 680 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 SERPINF1P36955 418 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 KIR3DL2P43630 455 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 RRAS2P62070 204 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 PSG7Q13046 419 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 HLXQ14774 488 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 GFOD2Q3B7J2 385 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 COMMD2Q86X83 199 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 C15orf40Q8WUR7 153 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 CMBLQ96DG6 245 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 DMRTB1Q96MA1 342 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 GON7Q9BXV9 100 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 ABCG5Q9H222 651 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 POFUT1Q9H488 388 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 GPR84Q9NQS5 396 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 DUSP13Q9UII6 198 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 NUBP2Q9Y5Y2 271 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 HECTD1Q9ULT8 2610 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 A0A1B0GVI7 797 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 SYT7O43581 403 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 TPPPO94811 219 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 ARSBP15848 533 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 CCL1P22362 96 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 MAPK3P27361 379 aaPredicted RBP12.64□□□□□ -0.39
DDX56-208ENST00000467318 RAG2P55895 527 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 FAM3AP98173 230 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 OR8B8Q15620 311 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 EFNB3Q15768 340 aa12.64□□□□□ -0.39
DDX56-208ENST00000467318 UBE2NLQ5JXB2 153 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms