RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RAB26Q9ULW5 256 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 LRRC42Q9Y546 428 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 ORC6Q9Y5N6 252 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 ENPP4Q9Y6X5 453 aa2.53□□□□□ -2
VPS13A-209ENST00000467124 IGHV3-72A0A0B4J1Y9 119 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 IGKV6-21A0A0C4DH24 114 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 K7ERQ8 282 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CCDC22O60826 627 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 UPK1BO75841 260 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 IGLV2-8P01709 118 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 IGHV3-11P01762 117 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 BGNP21810 368 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CXCR1P25024 350 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 TGFBR1P36897 503 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CXCL12P48061 93 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 RGS6P49758 472 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 TAS2R39P59534 338 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 KRTAP12-2P59991 146 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 C2orf54Q08AI8 447 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 STX4Q12846 297 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 STX3Q13277 289 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 PIGHQ14442 188 aaPredicted RBP2.52□□□□□ -2.01
VPS13A-209ENST00000467124 Q5W150 140 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 FAHD1Q6P587 224 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 LRRC8AQ8IWT6 810 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 OR4M1Q8NGD0 313 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CLHC1Q8NHS4 586 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 FOPNLQ96NB1 174 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 TOLLIPQ9H0E2 274 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 SLC38A1Q9H2H9 487 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CSNK1G1Q9HCP0 422 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 DOCK8Q8NF50 2099 aa2.52□□□□□ -2.01
VPS13A-209ENST00000467124 CCL15-CCL14A0A0B4J2E2 113 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 GOLGA8QA0A0J9YX86 632 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 M0QX08 132 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 M0R1B8 84 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 MYL12BO14950 172 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 MAGEB4O15481 346 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 RNF113AO15541 343 aaKnown RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 NDUFS5O43920 106 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 RPN2P04844 631 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ZNF32P17041 273 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 IL12BP29460 328 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 PFN3P60673 137 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 DMTNQ08495 405 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 CDC20Q12834 499 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 XRCC4Q13426 336 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 CCL15Q16663 113 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ABCA11PQ4W5N1 156 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ACTL10Q5JWF8 245 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 SETD3Q86TU7 594 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 SELENOHQ8IZQ5 122 aaKnown RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 SYCE1Q8N0S2 351 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 OR4M2Q8NGB6 313 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 OR10Z1Q8NGY1 313 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 OR1S1Q8NH92 325 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ZNF461Q8TAF7 563 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 LGALS14Q8TCE9 139 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ESR2Q92731 530 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ZNF396Q96N95 335 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 TBL1YQ9BQ87 522 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 EMC6Q9BV81 110 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 SFXN3Q9BWM7 321 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 BBS2Q9BXC9 721 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ULBP2Q9BZM5 246 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 COA1Q9GZY4 146 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 C1orf198Q9H425 327 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ACOT13Q9NPJ3 140 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 IFT46Q9NQC8 304 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 RMND1Q9NWS8 449 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 RHBDL2Q9NX52 303 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 C21orf62Q9NYP8 219 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 ENPP5Q9UJA9 477 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 CFL2Q9Y281 166 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 CABIN1Q9Y6J0 2220 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 BRCA1P38398 1863 aaKnown RBP2.51□□□□□ -2.01
VPS13A-209ENST00000467124 MYO10Q9HD67 2058 aa2.51□□□□□ -2.01
VPS13A-209ENST00000467124 DOCK9Q9BZ29 2069 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 LOC102724200A0A096LPH7 203 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-209ENST00000467124 IGHV3-49A0A0A0MS15 119 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 IGHV7-4-1A0A0J9YVY3 117 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 SLC5A10A0PJK1 596 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 ISPDA4D126 451 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 K7EM74 188 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 hCG_2039718K7EN88 272 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 YKT6O15498 198 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 ZNF324O75467 553 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-209ENST00000467124 CCNE2O96020 404 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 MMP7P09237 267 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-209ENST00000467124 OR5AL1P0C617 328 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 C1GALT1C1LP0DN25 315 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 CD28P10747 220 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 GRB2P62993 217 aaKnown RBP2.5□□□□□ -2.01
VPS13A-209ENST00000467124 ADIGQ0VDE8 80 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 LAMTOR4Q0VGL1 99 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 PMVKQ15126 192 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 GUSBP1Q15486 140 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 VAMP3Q15836 100 aa2.5□□□□□ -2.01
VPS13A-209ENST00000467124 YIF1BQ5BJH7 314 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms