RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NIPAL2Q9H841 368 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 ZNRD1Q9P1U0 126 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 SLC25A10Q9UBX3 287 aaPredicted RBP15.73■□□□□ 0.11
COL9A3-206ENST00000466532 LRP12Q9Y561 859 aa15.73■□□□□ 0.11
COL9A3-206ENST00000466532 BTBD17A6NE02 478 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 TIMM23O14925 209 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 HMGN1P05114 100 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 T-ENOLP0DO92 83 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 OSMP13725 252 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 CDK5Q00535 292 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 KLRD1Q13241 179 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 TAF9Q16594 264 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 DGUOKQ16854 277 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 FAM76BQ5HYJ3 339 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 SLC35D3Q5M8T2 416 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 KRT77Q7Z794 578 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 BBS1Q8NFJ9 593 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 ANGPTL6Q8NI99 470 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 FAM81AQ8TBF8 368 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 ZNF556Q9HAH1 456 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 LAMP5Q9UJQ1 280 aa15.72■□□□□ 0.11
COL9A3-206ENST00000466532 TET2Q6N021 2002 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-206ENST00000466532 NPFFO15130 113 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 E2F6O75461 281 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 CLPXO76031 633 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 NDUFB7P17568 137 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 GLRA1P23415 457 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 DCTDP32321 178 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 GPM6AP51674 278 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 PROK1P58294 105 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 DHRS7BQ6IAN0 325 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-206ENST00000466532 Q6ZSV7 163 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 HS3ST5Q8IZT8 346 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 ZSCAN4Q8NAM6 433 aaPredicted RBP15.71■□□□□ 0.11
COL9A3-206ENST00000466532 CCDC197Q8NCU1 140 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 PAPD5Q8NDF8 572 aaKnown RBP15.71■□□□□ 0.11
COL9A3-206ENST00000466532 CANT1Q8WVQ1 401 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 THTPAQ9BU02 230 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 NLKQ9UBE8 527 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 VPREB3Q9UKI3 123 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 TGP01266 2768 aa15.71■□□□□ 0.11
COL9A3-206ENST00000466532 ZNF816-ZNF321PA0A0X1KG74 233 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 A0A1W2PQ09 198 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 AQP12BA6NM10 295 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 OR2AT4A6NND4 320 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 SIGLEC5O15389 551 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 RHBDL1O75783 438 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 ACAA1P09110 424 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-206ENST00000466532 ALOX5APP20292 161 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 SLC2A5P22732 501 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 MAP2K3P46734 347 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 GABRA2P47869 451 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 HCCSP53701 268 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 ASPHD2Q6ICH7 369 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 AQP12AQ8IXF9 295 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 PNKDQ8N490 385 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 TNFRSF14Q92956 283 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 C1orf21Q9H246 121 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 MMP27Q9H306 513 aa15.7■□□□□ 0.1
COL9A3-206ENST00000466532 MEIOCA2RUB1 952 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 ZNF732B4DXR9 585 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 PSMD9O00233 223 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 FAM107AO95990 144 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 PAHP00439 452 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 PRKACGP22612 351 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 SAA4P35542 130 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 CAV3P56539 151 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 GNG3P63215 75 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 APOFQ13790 326 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 CEP78Q5JTW2 689 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 TMEM236Q5W0B7 351 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 C1orf122Q6ZSJ8 110 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 RBM4BQ9BQ04 359 aaKnown RBP15.69■□□□□ 0.1
COL9A3-206ENST00000466532 TEX12Q9BXU0 123 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 ELL3Q9HB65 397 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-206ENST00000466532 TCF7L1Q9HCS4 588 aa15.69■□□□□ 0.1
COL9A3-206ENST00000466532 A0A0U1RQV5 110 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 TMEM269A0A1B0GVZ9 245 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 M0R1W7 72 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 MRPL3P09001 348 aaKnown RBP15.68■□□□□ 0.1
COL9A3-206ENST00000466532 ANXA8P13928 327 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 HOXB6P17509 224 aaKnown RBP15.68■□□□□ 0.1
COL9A3-206ENST00000466532 UBE2E1P51965 193 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 CEACAM21Q3KPI0 293 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 NCR3LG1Q68D85 454 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 KCTD18Q6PI47 426 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-206ENST00000466532 COMMD2Q86X83 199 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 UBE2FQ969M7 185 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 DUS3LQ96G46 650 aaKnown RBP15.68■□□□□ 0.1
COL9A3-206ENST00000466532 MROQ9BYG7 248 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 YIPF3Q9GZM5 350 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 OR51I2Q9H344 312 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 C16orf95Q9H693 158 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 METTL8Q9H825 291 aaKnown RBP15.68■□□□□ 0.1
COL9A3-206ENST00000466532 SLC25A19Q9HC21 320 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 FAM206AQ9NX38 181 aa15.68■□□□□ 0.1
COL9A3-206ENST00000466532 IGKV1D-17A0A075B6S4 117 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 ACOD1A6NK06 481 aa15.67■□□□□ 0.1
COL9A3-206ENST00000466532 PSG2P11465 335 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms