RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 H3BN98 237 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 PSMD9O00233 223 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 SIGLEC5O15389 551 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 PLXNB1O43157 2135 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 CST4P01036 141 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 LYNP07948 512 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 GPM6AP51674 278 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 ERVFRD-1P60508 538 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 IL5RAQ01344 420 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 LY6EQ16553 131 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 CEP78Q5JTW2 689 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 SLC35E4Q6ICL7 350 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 CD300LDQ6UXZ3 194 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 C11orf44Q8N8P7 122 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 ZNRF1Q8ND25 227 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 OR10Z1Q8NGY1 313 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 LRTOMTQ8WZ04 291 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 DUS3LQ96G46 650 aaKnown RBP16.8■□□□□ 0.28
COL6A1-203ENST00000466285 RNF170Q96K19 258 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 ZNF488Q96MN9 340 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 C19orf12Q9NSK7 152 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 NLKQ9UBE8 527 aa16.8■□□□□ 0.28
COL6A1-203ENST00000466285 H3BUX3 64 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 NDUFB7P17568 137 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 SLC2A5P22732 501 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 POU1F1P28069 291 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 CEBPDP49716 269 aaPredicted RBP16.79■□□□□ 0.28
COL6A1-203ENST00000466285 BLVRAP53004 296 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 SPATS1Q496A3 300 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 FAM76BQ5HYJ3 339 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 C1orf122Q6ZSJ8 110 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 DHFR2Q86XF0 187 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 ZDHHC23Q8IYP9 409 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 ADGRG5Q8IZF4 528 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 CMTM4Q8IZR5 234 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 BATF2Q8N1L9 274 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 THEM6Q8WUY1 208 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 PPP1R14AQ96A00 147 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
COL6A1-203ENST00000466285 FOXJ3Q9UPW0 622 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 MPC1Q9Y5U8 109 aa16.79■□□□□ 0.28
COL6A1-203ENST00000466285 A0A1W2PQ09 198 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 TMEM210A6NLX4 147 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 OR2AT4A6NND4 320 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 B2RBV5 119 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 G3V4G9 280 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 CHST1O43916 411 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 ACAA1P09110 424 aaPredicted RBP16.78■□□□□ 0.28
COL6A1-203ENST00000466285 PSG2P11465 335 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 CFL1P23528 166 aaKnown RBP16.78■□□□□ 0.28
COL6A1-203ENST00000466285 GUCA2AQ02747 115 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 GINS1Q14691 196 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 TMEM236Q5W0B7 351 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 SHFQ7M4L6 423 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 OR51I2Q9H344 312 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 RGCCQ9H4X1 137 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 FAM206AQ9NX38 181 aa16.78■□□□□ 0.28
COL6A1-203ENST00000466285 PRB2P02812 416 aaPredicted RBP16.77■□□□□ 0.28
COL6A1-203ENST00000466285 MRPL3P09001 348 aaKnown RBP16.77■□□□□ 0.28
COL6A1-203ENST00000466285 GLRA1P23415 457 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 EEF1B2P24534 225 aaKnown RBP16.77■□□□□ 0.28
COL6A1-203ENST00000466285 GABRA2P47869 451 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 UBE2E1P51965 193 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 MFGE8Q08431 387 aaPredicted RBP16.77■□□□□ 0.28
COL6A1-203ENST00000466285 CRIP3Q6Q6R5 217 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 TRPM8Q7Z2W7 1104 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 CPOQ8IVL8 374 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 FAM185AQ8N0U4 392 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 TMEM185AQ8NFB2 350 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 GIPC3Q8TF64 312 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 DNTTIP1Q9H147 329 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 YY1AP1Q9H869 796 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 NDE1Q9NXR1 346 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 COPS3Q9UNS2 423 aa16.77■□□□□ 0.28
COL6A1-203ENST00000466285 DSCAML1Q8TD84 2053 aa16.77■□□□□ 0.27
COL6A1-203ENST00000466285 BTBD17A6NE02 478 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 CCDC182A6NF36 153 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 ZNF732B4DXR9 585 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 PRR23D1E9PI22 279 aaPredicted RBP16.76■□□□□ 0.27
COL6A1-203ENST00000466285 M0R1W7 72 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 GPR37O15354 613 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 ANGPTL7O43827 346 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 PAHP00439 452 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 APOC1P02654 83 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 PRR23D2P0DMB1 279 aaPredicted RBP16.76■□□□□ 0.27
COL6A1-203ENST00000466285 T-ENOLP0DO92 83 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 CAV3P56539 151 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 TRIM25Q14258 630 aaKnown RBP16.76■□□□□ 0.27
COL6A1-203ENST00000466285 FAM98BQ52LJ0 330 aaKnown RBP16.76■□□□□ 0.27
COL6A1-203ENST00000466285 MKXQ8IYA7 352 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 BEND2Q8NDZ0 799 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 METTL8Q9H825 291 aaKnown RBP16.76■□□□□ 0.27
COL6A1-203ENST00000466285 NIPAL2Q9H841 368 aa16.76■□□□□ 0.27
COL6A1-203ENST00000466285 M0R129 80 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 SYNGR1O43759 233 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 DCTN3O75935 186 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 FAM107AO95990 144 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 FAHP16930 419 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 ALOX5APP20292 161 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 PRKACGP22612 351 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms