RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 OR11H4Q8NGC9 324 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 MGAT4AQ9UM21 535 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 SVILO95425 2214 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 CHRM2P08172 466 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 GSK3AP49840 483 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF92Q03936 586 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 NKPD1Q17RQ9 610 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 SCGB2B2Q4G0G5 96 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 PLAC9Q5JTB6 97 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CD163Q86VB7 1156 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 BPIFB2Q8N4F0 458 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF431Q8TF32 576 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-205ENST00000466192 C1QTNF5Q9BXJ0 243 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CHIAQ9BZP6 476 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CHST6Q9GZX3 395 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 GP6Q9HCN6 339 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 GPR173Q9NS66 373 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CA10Q9NS85 328 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CLCF1Q9UBD9 225 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 MGAT4CQ9UBM8 478 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 ATPIF1Q9UII2 106 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 GTF3C1Q12789 2109 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 SNRPGP15A8MWD9 76 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 IL18BPO95998 194 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CD74P04233 296 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF735P0CB33 412 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 M6PRP20645 277 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 RIPPLY1Q0D2K3 151 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 C9orf62Q8N4C0 152 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 SPERTQ8NA61 448 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 OR10K1Q8NGX5 313 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 TNFAIP8L1Q8WVP5 186 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 RAB3CQ96E17 227 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 CYYR1Q96J86 154 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 SLC6A7Q99884 636 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 NUDT16L1Q9BRJ7 211 aaKnown RBP15.85■□□□□ 0.13
COL9A3-205ENST00000466192 IFT46Q9NQC8 304 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF107Q9UII5 783 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-205ENST00000466192 KCNK7Q9Y2U2 307 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 NPTNQ9Y639 398 aa15.85■□□□□ 0.13
COL9A3-205ENST00000466192 hCG_38984A0A1B0GV85 526 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 AQP7O14520 342 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 UBBP0CG47 229 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 CD79AP11912 226 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 FAM3AP98173 230 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 FBXW9Q5XUX1 488 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 COLCA1Q6ZS62 124 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 NLRC3Q7RTR2 1065 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 P4HA3Q7Z4N8 544 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 OR2T35Q8NGX2 323 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 GMPPAQ96IJ6 420 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-205ENST00000466192 TAAR6Q96RI8 345 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 DHRS9Q9BPW9 319 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 CST11Q9H112 138 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 RGCCQ9H4X1 137 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF391Q9UJN7 358 aa15.84■□□□□ 0.13
COL9A3-205ENST00000466192 SSX5O60225 188 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 TOXO94900 526 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 NAT2P11245 290 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 CCL2P13500 99 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 SERPINA2P20848 420 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 HTR2BP41595 481 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 TMEM50BP56557 158 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 RAB1AP62820 205 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 ZADH2Q8N4Q0 377 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 S100A13Q99584 98 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 URM1Q9BTM9 101 aaKnown RBP15.83■□□□□ 0.13
COL9A3-205ENST00000466192 POFUT1Q9H488 388 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 ELL3Q9HB65 397 aaPredicted RBP15.83■□□□□ 0.13
COL9A3-205ENST00000466192 SCP2D1Q9UJQ7 156 aa15.83■□□□□ 0.13
COL9A3-205ENST00000466192 ZSCAN5BA6NJL1 495 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 SS18L1O75177 396 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-205ENST00000466192 HIST1H1DP16402 221 aaKnown RBP15.83■□□□□ 0.12
COL9A3-205ENST00000466192 NAT1P18440 290 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 DNASE1P24855 282 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 MPGP29372 298 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 ALDH3B1P43353 468 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 OR3A3P47888 321 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 OR3A2P47893 321 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 UBE2MP61081 183 aaKnown RBP15.83■□□□□ 0.12
COL9A3-205ENST00000466192 ZNF169Q14929 603 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-205ENST00000466192 RNASE10Q5GAN6 216 aaKnown RBP15.83■□□□□ 0.12
COL9A3-205ENST00000466192 CCDC28AQ8IWP9 274 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 UXS1Q8NBZ7 420 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 OR51T1Q8NGJ9 327 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 ARHGAP5-AS1Q96IT6 56 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 TRIB1Q96RU8 372 aa15.83■□□□□ 0.12
COL9A3-205ENST00000466192 CACNA1GO43497 2377 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 UBE2QL1A1L167 161 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 ZNF780AO75290 641 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-205ENST00000466192 MGMTP16455 207 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 CCNOP22674 350 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 HRH1P35367 487 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 C4orf46Q504U0 113 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 HIKESHIQ53FT3 197 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 IGFL3Q6UXB1 125 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 TMED4Q7Z7H5 227 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 SPICQ8N5J4 248 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 OR56B1Q8NGI3 324 aa15.82■□□□□ 0.12
COL9A3-205ENST00000466192 OR5M9Q8NGP3 310 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms