RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DOK3Q7L591 496 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 RNF144BQ7Z419 303 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 WDFY1Q8IWB7 410 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 FOXRED2Q8IWF2 684 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SLC22A18ASQ8N1D0 253 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ZNF441Q8N8Z8 693 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 OR8G5Q8NG78 346 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ST8SIA1Q92185 356 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TSLPQ969D9 159 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ERGIC1Q969X5 290 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 GNRHR2Q96P88 292 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 ST6GALNAC5Q9BVH7 336 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 TM2D1Q9BX74 207 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 PECRQ9BY49 303 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 SMIM3Q9BZL3 60 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 NRSN2Q9GZP1 204 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 EIF5A2Q9GZV4 153 aaKnown RBP6.43□□□□□ -1.38
USP48-206ENST00000464577 WWTR1Q9GZV5 400 aa6.43□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PP11 408 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 A0A1W2PPE2 198 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 ANKUB1A6NFN9 424 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 RHPN2P1A8MT19 583 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 ADAM10O14672 748 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 DAOP14920 347 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 ZNF16P17020 682 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 CAPZBP47756 277 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 DHPSP49366 369 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 SUMO3P55854 103 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 OR2B8PP59922 312 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 POU3F1Q03052 451 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 ACY1Q03154 408 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 ABHD12BQ7Z5M8 362 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 SULF2Q8IWU5 870 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 OR8B12Q8NGG6 310 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 OR51T1Q8NGJ9 327 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 HPSE2Q8WWQ2 592 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 MRPL24Q96A35 216 aaKnown RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 SHDQ96IW2 340 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 MRGPRX1Q96LB2 322 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 SPACA5Q96QH8 159 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 GAS2L1Q99501 681 aaPredicted RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 C20orf24Q9BUV8 137 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 CHRNA10Q9GZZ6 450 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 UNKLQ9H9P5 680 aaKnown RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 WFDC1Q9HC57 220 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 SLC2A4RGQ9NR83 387 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 ALKBH4Q9NXW9 302 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 TCFL5Q9UL49 500 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 LSM5Q9Y4Y9 91 aaKnown RBP6.42□□□□□ -1.38
USP48-206ENST00000464577 LHFPL6Q9Y693 200 aa6.42□□□□□ -1.38
USP48-206ENST00000464577 A0A087WWC5 75 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 K7N7A8 449 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 OR2C1O95371 312 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 KNG1P01042 644 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ARG1P05089 322 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 SLC2A1P11166 492 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 APOBEC1P41238 236 aaKnown RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 TLE3Q04726 772 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 KIAA0141Q14154 515 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 IL13RA2Q14627 380 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 THEM4Q5T1C6 240 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 NCMAPQ5T1S8 102 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 SLC16A14Q7RTX9 510 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 LRTM2Q8N967 370 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 SEMA6DQ8NFY4 1073 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 PHOSPHO2Q8TCD6 241 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 STT3BQ8TCJ2 826 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 CD300LFQ8TDQ1 290 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 DAZLQ92904 295 aaKnown RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 FGF14Q92915 247 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 MUCL1Q96DR8 90 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 GPER1Q99527 375 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 MRPL13Q9BYD1 178 aaKnown RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 CHST5Q9GZS9 411 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 UCK1Q9HA47 277 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 BCO1Q9HAY6 547 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 GPR84Q9NQS5 396 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 MED29Q9NX70 200 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 TMED3Q9Y3Q3 217 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ARHGEF17Q96PE2 2063 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 FREM3P0C091 2139 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 IGKV1-9A0A0C4DH69 117 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 CDC14CA4D256 554 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 H7C1Q1 480 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 GIMD1P0DJR0 217 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 CTSEP14091 401 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 FOSL1P15407 271 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ZNF17P17021 662 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 S100A2P29034 98 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 BLVRBP30043 206 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 BIDP55957 195 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ZNF121P58317 390 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 CD81P60033 236 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 HIKESHIQ53FT3 197 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms