RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 C8orf4Q9NR00 106 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 RASL12Q9NYN1 266 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 PIGLQ9Y2B2 252 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 V9GYS6 101 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 MXRA5Q9NR99 2828 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 COL6A5A8TX70 2615 aa13.54□□□□□ -0.24
SSNA1-204ENST00000464553 A0A1B0GTI1 187 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 TRIM77I1YAP6 450 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 RPSAP08865 295 aaKnown RBP13.53□□□□□ -0.24
SSNA1-204ENST00000464553 TGM4P49221 684 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 CSNK2BP67870 215 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
SSNA1-204ENST00000464553 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 KCTD8Q6ZWB6 473 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 ZNF573Q86YE8 665 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 OR10H4Q8NGA5 316 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 HPSE2Q8WWQ2 592 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 STMN2Q93045 179 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
SSNA1-204ENST00000464553 C19orf24Q9BVV8 132 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.53□□□□□ -0.24
SSNA1-204ENST00000464553 SLC22A13Q9Y226 551 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
SSNA1-204ENST00000464553 ZNF732B4DXR9 585 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 J3QRE1 110 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 DVL1O14640 695 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 TMPRSS2O15393 492 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 SLC16A6O15403 523 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ENTPD6O75354 484 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 GYPAP02724 150 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ACAA1P09110 424 aaPredicted RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 GPM6AP51674 278 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ISL1P61371 349 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 FDX2Q6P4F2 183 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 RBMS3Q6XE24 437 aaKnown RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 FAM220AQ7Z4H9 259 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 CATSPERDQ86XM0 798 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 C19orf18Q8NEA5 215 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 OR14K1Q8NGZ2 314 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 RPL3LQ92901 407 aaKnown RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 UBE2FQ969M7 185 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 PPP1R14AQ96A00 147 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 TECTBQ96PL2 329 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 ADI1Q9BV57 179 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 CTSZQ9UBR2 303 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 GTF2A1LQ9UNN4 478 aa13.52□□□□□ -0.25
SSNA1-204ENST00000464553 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.25
SSNA1-204ENST00000464553 LOC100130705A0A1B0GUX0 176 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 ZNF879B4DU55 563 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 MAGEB4O15481 346 aaPredicted RBP13.51□□□□□ -0.25
SSNA1-204ENST00000464553 NDUFB3O43676 98 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 NOS1APO75052 506 aaPredicted RBP13.51□□□□□ -0.25
SSNA1-204ENST00000464553 VENTXO95231 258 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 FAHP16930 419 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 EGR1P18146 543 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 ZSCAN26Q16670 478 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 KLF17Q5JT82 389 aaPredicted RBP13.51□□□□□ -0.25
SSNA1-204ENST00000464553 MOB3CQ70IA8 216 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 SSX6Q7RTT6 188 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 RORBQ92753 470 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 RNFT2Q96EX2 444 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 MBOAT4Q96T53 435 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 TBX5Q99593 518 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 SLC29A1Q99808 456 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 TTTY10Q9BZA0 68 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 ZMAT3Q9HA38 289 aaKnown RBP13.51□□□□□ -0.25
SSNA1-204ENST00000464553 DNAJB11Q9UBS4 358 aa13.51□□□□□ -0.25
SSNA1-204ENST00000464553 A0A1B0GVI7 797 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 DAPL1A0PJW8 107 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 P2RY10O00398 339 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
SSNA1-204ENST00000464553 PLATP00750 562 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 UBCP0CG48 685 aaKnown RBP13.5□□□□□ -0.25
SSNA1-204ENST00000464553 GABRB1P18505 474 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 CCR9P51686 369 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 ACTA2P62736 377 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 ACTG2P63267 376 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 ZNF85Q03923 595 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 LRRC10Q5BKY1 277 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 CEP78Q5JTW2 689 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 TMEM244Q5VVB8 128 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 PLCXD3Q63HM9 321 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 STUMQ69YW2 141 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 AQP3Q92482 292 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 CNTD2Q9H8S5 307 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 INPP5EQ9NRR6 644 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 MRPS18AQ9NVS2 196 aaKnown RBP13.5□□□□□ -0.25
SSNA1-204ENST00000464553 FAM118AQ9NWS6 357 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 POLDIP2Q9Y2S7 368 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 WNK2Q9Y3S1 2297 aa13.5□□□□□ -0.25
SSNA1-204ENST00000464553 PQLC2LA1A4F0 135 aa13.49□□□□□ -0.25
SSNA1-204ENST00000464553 C22orf46C9J442 243 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms