RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 OR10R2Q8NGX6 335 aa18.93■□□□□ 0.62
PDLIM2-216ENST00000464275 OR2AE1Q8NHA4 323 aa18.93■□□□□ 0.62
PDLIM2-216ENST00000464275 TMEM235A6NFC5 223 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 WIPF3A6NGB9 483 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 CXCL2P19875 107 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 SDHBP21912 280 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 S100A11P31949 105 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 ALDH3B1P43353 468 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 PMP22Q01453 160 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 RSPO4Q2I0M5 234 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 NUFIP2Q7Z417 695 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 LPAR5Q9H1C0 372 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 ZMAT3Q9HA38 289 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 GP6Q9HCN6 339 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 ZNF175Q9Y473 711 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 H3BUI4 141 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 CDC14BO60729 498 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 B3GALNT1O75752 331 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 CD3DP04234 171 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 ZMYND11Q15326 602 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 DEFB109BQ30KR1 87 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 CDNFQ49AH0 187 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 FAM209AQ5JX71 171 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 TNFAIP8L1Q8WVP5 186 aa18.92■□□□□ 0.62
PDLIM2-216ENST00000464275 TRAV17A0A0B4J275 112 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 SLC22A20A6NK97 555 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 MPIG6BO95866 241 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 IGHG3P01860 377 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 CALCRP30988 508 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 PTGFRP43088 359 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 C9orf135Q5VTT2 229 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 CRIP3Q6Q6R5 217 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 NPRL2Q8WTW4 380 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 TMEM59Q9BXS4 323 aa18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 CNOT1A5YKK6 2376 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-216ENST00000464275 B8ZZF3 427 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 I3L521 148 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 XRCC2O43543 280 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 RP2O75695 350 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 RAB3DO95716 219 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CYB5AP00167 134 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CFDP00746 253 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CD74P04233 296 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 COX5BP10606 129 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 NAT2P11245 290 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 FCGR2AP12318 317 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 PPP3CBP16298 524 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 MEF2DQ14814 521 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 LPCAT3Q6P1A2 487 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 TMEM104Q8NE00 496 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 OR4D10Q8NGI6 311 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 OR8S1Q8NH09 359 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 LRRC20Q8TCA0 184 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CMBLQ96DG6 245 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 URM1Q9BTM9 101 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 PRDM14Q9GZV8 571 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 ACKR3P25106 362 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 FOXG1P55316 489 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 AANATQ16613 207 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CLVS2Q5SYC1 327 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 FJX1Q86VR8 437 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 MUC20Q8N307 709 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CPEB3Q8NE35 698 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 OR52B4Q8NGK2 314 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 DVL3Q92997 716 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 C1QTNF5Q9BXJ0 243 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 CST11Q9H112 138 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 KLK13Q9UKR3 277 aa18.9■□□□□ 0.62
PDLIM2-216ENST00000464275 A0A096LPE4 126 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 A0A1W2PPZ6 126 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 CRTAPO75718 401 aaPredicted RBP18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 CEACAM4O75871 244 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 MPZP25189 248 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 AGTR1P30556 359 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 BAMBIQ13145 260 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF584Q8IVC4 421 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 PIGTQ969N2 578 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 SPSB1Q96BD6 273 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 NICN1Q9BSH3 213 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 SELENOIQ9C0D9 397 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 GPR173Q9NS66 373 aa18.89■□□□□ 0.61
PDLIM2-216ENST00000464275 A0A0A6YYD4 124 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 TMEM82A0PJX8 343 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 H2BFSP57053 126 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 CNN3Q15417 329 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 C4orf46Q504U0 113 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 TRAPPC6BQ86SZ2 158 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 OR56B1Q8NGI3 324 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 BANF2Q9H503 90 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 SLC2A8Q9NY64 477 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 hCG_38984A0A1B0GV85 526 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 ZNF736B4DX44 427 aaPredicted RBP18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 GOSR2O14653 212 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 FCER2P06734 321 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 GSTP1P09211 210 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 PRKACBP22694 351 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 ARR3P36575 388 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 SLC22A6Q4U2R8 563 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 DMRTC1Q5HYR2 192 aa18.88■□□□□ 0.61
PDLIM2-216ENST00000464275 RFPL4BQ6ZWI9 263 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms