RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 OPN1MWP04001 364 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 OPN1MW2P0DN77 364 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 OPN1MW3P0DN78 364 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 ATP6V1B2P21281 511 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 POU1F1P28069 291 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 MICAQ29983 383 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 SPATS1Q496A3 300 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 KPRPQ5T749 579 aaPredicted RBP18.43■□□□□ 0.54
USP4-208ENST00000464168 KCTD8Q6ZWB6 473 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 CFHR4Q92496 578 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 PIGCQ92535 297 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 RORBQ92753 470 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 ELL3Q9HB65 397 aaPredicted RBP18.43■□□□□ 0.54
USP4-208ENST00000464168 ARL8BQ9NVJ2 186 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 NLKQ9UBE8 527 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 FOXJ3Q9UPW0 622 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 U3KQV3 271 aa18.43■□□□□ 0.54
USP4-208ENST00000464168 IGKV1D-17A0A075B6S4 117 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 RHBDL1O75783 438 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 GLCEO94923 617 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 GABRA2P47869 451 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 BLMHQ13867 455 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 LY6EQ16553 131 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 CRIP3Q6Q6R5 217 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.42■□□□□ 0.54
USP4-208ENST00000464168 DEFB107AQ8IZN7 70 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 ZNRF1Q8ND25 227 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 OTULINQ96BN8 352 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 FAM107BQ9H098 131 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 FAM234AQ9H0X4 552 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 MED4Q9NPJ6 270 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 ACTR3BQ9P1U1 418 aa18.42■□□□□ 0.54
USP4-208ENST00000464168 H0YAE9 185 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 GLRA1P23415 457 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 SAMD5Q5TGI4 173 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 C11orf88Q6PI97 169 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 CD300LDQ6UXZ3 194 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 ZDHHC23Q8IYP9 409 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 IQCF1Q8N6M8 205 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 C11orf44Q8N8P7 122 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 OR51G2Q8NGK0 314 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 OR5D13Q8NGL4 314 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 OTOSQ8NHW6 89 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 MEGF9Q9H1U4 602 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 TAGLN3Q9UI15 199 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 ZNF222Q9UK12 451 aa18.41■□□□□ 0.54
USP4-208ENST00000464168 SAMHD1Q9Y3Z3 626 aaKnown RBP18.41■□□□□ 0.54
USP4-208ENST00000464168 TCRBV5S2A0A599 114 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 ANGPTL7O43827 346 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 PSG2P11465 335 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 PAX6P26367 422 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 GPM6AP51674 278 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 OR2T5Q6IEZ7 315 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 CPLX4Q7Z7G2 160 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 OR4C13Q8NGP0 309 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 OR2T29Q8NH02 315 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 THEM6Q8WUY1 208 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 NIPSNAP1Q9BPW8 284 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 OR51V1Q9H2C8 321 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 OR51I2Q9H344 312 aa18.4■□□□□ 0.54
USP4-208ENST00000464168 TRBV23-1A0A0A0MS06 115 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 MEGF11A6BM72 1044 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 PLXNB1O43157 2135 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 PRB2P02812 416 aaPredicted RBP18.39■□□□□ 0.53
USP4-208ENST00000464168 LYNP07948 512 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 AANATQ16613 207 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 LRRC75BQ2VPJ9 315 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 C16orf89Q6UX73 402 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 KRT74Q7RTS7 529 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 KLHDC1Q8N7A1 406 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 ZNF454Q8N9F8 522 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 OR8B12Q8NGG6 310 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 HIST1H2AAQ96QV6 131 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 MAGIXQ9H6Y5 334 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 REEP1Q9H902 201 aa18.39■□□□□ 0.53
USP4-208ENST00000464168 SELENOFO60613 162 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 Q6ZPA2 131 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 MKXQ8IYA7 352 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 FAM185AQ8N0U4 392 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 PAPD5Q8NDF8 572 aaKnown RBP18.38■□□□□ 0.53
USP4-208ENST00000464168 TMEM185AQ8NFB2 350 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 OR2T6Q8NHC8 308 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 TEX47Q8TBZ9 253 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 SDSLQ96GA7 329 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 RANBP3Q9H6Z4 567 aaPredicted RBP18.38■□□□□ 0.53
USP4-208ENST00000464168 YY1AP1Q9H869 796 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 C19orf12Q9NSK7 152 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 KLHDC2Q9Y2U9 406 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 ZNF281Q9Y2X9 895 aa18.38■□□□□ 0.53
USP4-208ENST00000464168 ZNF732B4DXR9 585 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 PSMA6P60900 246 aaKnown RBP18.37■□□□□ 0.53
USP4-208ENST00000464168 GNG3P63215 75 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 CEACAM21Q3KPI0 293 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 C11orf42Q8N5U0 333 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 OR10G2Q8NGC3 310 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 PIFOQ8TCI5 191 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 FEVQ99581 238 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 RAB18Q9NP72 206 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 NDE1Q9NXR1 346 aa18.37■□□□□ 0.53
USP4-208ENST00000464168 TAS2R1Q9NYW7 299 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms