RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 FAM57BQ71RH2 274 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 TMEM219Q86XT9 240 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 TIGD4Q8IY51 512 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 OR52H1Q8NGJ2 320 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 OR51L1Q8NGJ5 315 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 OR5P3Q8WZ94 311 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 RCN3Q96D15 328 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 HIST1H2AAQ96QV6 131 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 OR10A2Q9H208 303 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 C19orf12Q9NSK7 152 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 LRP12Q9Y561 859 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 COMMD3-BMI1R4GMX3 469 aa11.68□□□□□ -0.54
SMC1A-204ENST00000463684 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 H3BUI4 141 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 F2RL2O00254 374 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 RHBDL1O75783 438 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 GADD45GO95257 159 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 CLIC3O95833 236 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 PSG2P11465 335 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 PSKH1P11801 424 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 RPL31P62899 125 aaKnown RBP11.67□□□□□ -0.54
SMC1A-204ENST00000463684 PRDX4Q13162 271 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 DCTN2Q13561 401 aaKnown RBP11.67□□□□□ -0.54
SMC1A-204ENST00000463684 KLHL12Q53G59 568 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 FAM76BQ5HYJ3 339 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 TEX30Q5JUR7 227 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 LHFPL4Q7Z7J7 247 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-204ENST00000463684 ZNRF4Q8WWF5 429 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 PIGCQ92535 297 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 DPF1Q92782 380 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 FOXRED1Q96CU9 486 aaPredicted RBP11.67□□□□□ -0.54
SMC1A-204ENST00000463684 MALSU1Q96EH3 234 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 C7orf34Q96L11 122 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 DHRS1Q96LJ7 313 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 FUZQ9BT04 418 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 MUC13Q9H3R2 512 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
SMC1A-204ENST00000463684 TCRBV4S1A1TA0A5B7 111 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 DHRS12A0PJE2 317 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 FAM90A8PA6NJQ4 464 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 NCK1P16333 377 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 SLC25A1P53007 311 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 BLCAPP62952 87 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 TMEM200BQ69YZ2 307 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF511Q8NB15 262 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 OR52L1Q8NGH7 329 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF671Q8TAW3 534 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 GNPDA2Q8TDQ7 276 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 PGAM5Q96HS1 289 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 HOPXQ9BPY8 73 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-204ENST00000463684 KCTD14Q9BQ13 255 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-204ENST00000463684 GPR61Q9BZJ8 451 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 DNAJC27Q9NZQ0 273 aa11.66□□□□□ -0.54
SMC1A-204ENST00000463684 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
SMC1A-204ENST00000463684 TSSC4Q9Y5U2 329 aaPredicted RBP11.66□□□□□ -0.54
SMC1A-204ENST00000463684 NME4O00746 187 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 NDUFAB1O14561 156 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 SYNGR1O43759 233 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 CST4P01036 141 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 ARG1P05089 322 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 HOXD3P31249 432 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF121P58317 390 aaPredicted RBP11.65□□□□□ -0.54
SMC1A-204ENST00000463684 EGFEM1PQ0D2K5 195 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 EIF2B1Q14232 305 aaKnown RBP11.65□□□□□ -0.54
SMC1A-204ENST00000463684 SSX2Q16385 188 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 Q6ZS46 218 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 PRSS45Q7RTY3 260 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 ZDHHC23Q8IYP9 409 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 DYNAPQ8N1N2 210 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 C11orf42Q8N5U0 333 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 OR2T27Q8NH04 317 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 C1orf21Q9H246 121 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 ZNF222Q9UK12 451 aa11.65□□□□□ -0.54
SMC1A-204ENST00000463684 SAMD4AQ9UPU9 718 aaKnown RBP11.65□□□□□ -0.54
SMC1A-204ENST00000463684 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 SLC1A7O00341 560 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 GMNNO75496 209 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-204ENST00000463684 DCTDP32321 178 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 GSSP48637 474 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 GPM6AP51674 278 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 BLVRAP53004 296 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 OR12D2P58182 307 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 TSPAN31Q12999 210 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 TMEM95Q3KNT9 176 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 RPL13AP3Q6NVV1 102 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 ZNF782Q6ZMW2 699 aaPredicted RBP11.64□□□□□ -0.55
SMC1A-204ENST00000463684 THAP5Q7Z6K1 395 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 CALHM1Q8IU99 346 aa11.64□□□□□ -0.55
SMC1A-204ENST00000463684 SLC37A3Q8NCC5 494 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms