RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 Q8TCH9 128 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 OR5P3Q8WZ94 311 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 GHSRQ92847 366 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 DVL3Q92997 716 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-206ENST00000462613 PPP1R14AQ96A00 147 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 TMEM106AQ96A25 262 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 SPSB1Q96BD6 273 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 FGGYQ96C11 551 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ITPKCQ96DU7 683 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 C18orf12Q96KH6 178 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 OPALINQ96PE5 141 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ZNF649Q9BS31 505 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 REG4Q9BYZ8 158 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 BPESC1Q9GZL8 116 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 SLITRK2Q9H156 845 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ISYNA1Q9NPH2 558 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 GPR173Q9NS66 373 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 TREM2Q9NZC2 230 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 LRRC42Q9Y546 428 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 NPTNQ9Y639 398 aa5.4□□□□□ -1.54
SF3B1-206ENST00000462613 ITPR3Q14573 2671 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.557e-7■□□□□ 8.9
SF3B1-206ENST00000462613 PPIAL4EA0A075B759 164 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV4-30-2A0A087WSY4 118 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 IGHV3-64DA0A0J9YX35 117 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 FAM230AA0A1W2PPH8 454 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 A6NIN4 97 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF879B4DU55 563 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 RNF223E7ERA6 249 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 E9PI62 339 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PPIAL4DF5H284 164 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 LYNX1G3V0Z9 82 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM178BH3BS89 294 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 H7C1Q1 480 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 J3QT63 122 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 SMAD7O15105 426 aaKnown RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 NDUFA2O43678 99 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 RP2O75695 350 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PTBP3O95758 552 aaKnown RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 CD1AP06126 327 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PPIAL4FP0DN26 164 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 LYNX1P0DP58 116 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 RAB3AP20336 220 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PCMT1P22061 227 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 CPT2P23786 658 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 AZGP1P25311 298 aaKnown RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 HAAOP46952 286 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 SOX2P48431 317 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 GZMKP49863 264 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 GTF2A1P52655 376 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MTCP1P56278 107 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 LOXL1Q08397 574 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MLLT11Q13015 90 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF154Q13106 437 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MAB21L1Q13394 359 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 RIN1Q13671 783 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MICBQ29980 383 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM155Q4W5P6 130 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 AVPI1Q5T686 147 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PRAMEF6Q5VXH4 476 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 TMEM42Q69YG0 159 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 DMKNQ6E0U4 476 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 HAGHLQ6PII5 290 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 DNM1P46Q6ZS02 220 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 UTS2BQ765I0 119 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 KRT74Q7RTS7 529 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MKXQ8IYA7 352 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 Q8IYB0 196 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PARP16Q8N5Y8 322 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ZFP41Q8N8Y5 198 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 BOLLQ8N9W6 283 aaKnown RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 SCCPDHQ8NBX0 429 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 DNAAF1Q8NEP3 725 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 OR10Z1Q8NGY1 313 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ZNF420Q8TAQ5 688 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 TRMT10AQ8TBZ6 339 aaKnown RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 NPRL2Q8WTW4 380 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 LRRC29Q8WV35 223 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 YIPF5Q969M3 257 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 GPER1Q99527 375 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 S100A13Q99584 98 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 MGLLQ99685 303 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 SOX7Q9BT81 388 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PKIBQ9C010 78 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ZCCHC4Q9H5U6 513 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 NARFLQ9H6Q4 476 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PAK1IP1Q9NWT1 392 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-206ENST00000462613 C1orf123Q9NWV4 160 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 UBAP1Q9NZ09 502 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 DNAJB11Q9UBS4 358 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 WIPI2Q9Y4P8 454 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 PPIAL4AQ9Y536 164 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 ABCA1O95477 2261 aa5.39□□□□□ -1.55
SF3B1-206ENST00000462613 A0A087WXM4 84 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 LOC100289279A0A1B0GTE1 492 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 MEGF11A6BM72 1044 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TRIM64A6NGJ6 449 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 OOEPA6NGQ2 149 aa5.38□□□□□ -1.55
SF3B1-206ENST00000462613 TRIM64BA6NI03 449 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms