RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 EGLN3Q9H6Z9 239 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 MTHFD2LQ9H903 347 aaPredicted RBP3.84□□□□□ -1.79
COPS3-204ENST00000462236 MID1IP1Q9NPA3 183 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 PLCXD1Q9NUJ7 323 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 MRGBPQ9NV56 204 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 FBXL3Q9UKT7 428 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 WDR45Q9Y484 360 aa3.84□□□□□ -1.79
COPS3-204ENST00000462236 A0A096LPI6 279 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 KIR2DS1A0A191URI9 304 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 ZSCAN5BA6NJL1 495 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 A8MVM7 634 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 PRSS46E5RG02 174 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 G3V2L1 256 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SLC28A1O00337 649 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MGRN1O60291 552 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 UBL3O95164 117 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 FSTL3O95633 263 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 OR8G3PP0DMU2 310 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 UROSP10746 265 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 THRBP10828 461 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 CD79AP11912 226 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 NEFHP12036 1026 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 ZNF43P17038 809 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 LBPP18428 481 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 TAC1P20366 129 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 GCAP28676 217 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SERPINB9P50453 376 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 PLTPP55058 493 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SNU13P55769 128 aaKnown RBP3.83□□□□□ -1.8
COPS3-204ENST00000462236 UCP2P55851 309 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 NAA20P61599 178 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 CAV1Q03135 178 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 C2orf54Q08AI8 447 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 ZMYND11Q15326 602 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MAPK11Q15759 364 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MRGPRG-AS1Q2M3A8 158 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MS4A18Q3C1V0 323 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 CEP85LQ5SZL2 805 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MRPL2Q5T653 305 aaKnown RBP3.83□□□□□ -1.8
COPS3-204ENST00000462236 ZNF770Q6IQ21 691 aaPredicted RBP3.83□□□□□ -1.8
COPS3-204ENST00000462236 C6orf89Q6UWU4 347 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 C6orf120Q7Z4R8 191 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 LCA5Q86VQ0 697 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SKA3Q8IX90 412 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 GPR137CQ8N3F9 429 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SPICQ8N5J4 248 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 LRTM2Q8N967 370 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 OR4C15Q8NGM1 316 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 OR5AK3PQ8NH89 298 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 CCL17Q92583 94 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 ROPN1LQ96C74 230 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 CHMP6Q96FZ7 201 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SLC41A3Q96GZ6 507 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 SLC30A2Q9BRI3 323 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 BCL2L14Q9BZR8 327 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 OR51I1Q9H343 314 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 GPR173Q9NS66 373 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 UBAP1Q9NZ09 502 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 NINJ2Q9NZG7 142 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 EMCNQ9ULC0 261 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 GPR132Q9UNW8 380 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 PPP1R3CQ9UQK1 317 aa3.83□□□□□ -1.8
COPS3-204ENST00000462236 MRPS28Q9Y2Q9 187 aaKnown RBP3.83□□□□□ -1.8
COPS3-204ENST00000462236 CENPVL3A0A0U1RRI6 287 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 ISPDA4D126 451 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 CFAP73A6NFT4 308 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 CEACAM18A8MTB9 384 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 C3orf84H3BNL1 204 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 CCL24O00175 119 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 SLC1A7O00341 560 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 HMGN4O00479 90 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 LYPLA1O75608 230 aaPredicted RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 RAB36O95755 333 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 HPRP00739 348 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 C1QCP02747 245 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 MMP7P09237 267 aaPredicted RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 OR12D1P0DN82 309 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 B4GALT1P15291 398 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 CXCR1P25024 350 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 DUTP33316 252 aaKnown RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 HPCAL1P37235 193 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 MPV17P39210 176 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 EFNB2P52799 333 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 AQP5P55064 265 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 DNAJB13P59910 316 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 STX1BP61266 288 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 BTG1P62324 171 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 RPL38P63173 70 aaKnown RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 PMS2P3Q13401 168 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 HERPUD1Q15011 391 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 CHI3L2Q15782 390 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 UAP1Q16222 522 aaPredicted RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 MOGQ16653 247 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 XKR7Q5GH72 579 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 TEX35Q5T0J7 233 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 WDR88Q6ZMY6 472 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 LRRC74BQ6ZQY2 392 aa3.82□□□□□ -1.8
COPS3-204ENST00000462236 PIWIL3Q7Z3Z3 882 aaKnown RBP3.82□□□□□ -1.8
COPS3-204ENST00000462236 HMGN2P46Q86SG4 172 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms