RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HDHD2Q9H0R4 259 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 MAB21L2Q9Y586 359 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 A0A1W2PRD5 423 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 A0A1W2PRF3 423 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 A0A1W2PRM7 423 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 H3BUX3 64 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 K7EIL1 84 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 RENP00797 406 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 HIST1H1CP16403 213 aaKnown RBP14.08□□□□□ -0.16
TOP3A-202ENST00000461127 CD33P20138 364 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 SAA4P35542 130 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 SNRPGP62308 76 aaKnown RBP14.08□□□□□ -0.16
TOP3A-202ENST00000461127 CD69Q07108 199 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 MALLQ13021 153 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 FAM122BQ7Z309 247 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 GLB1L2Q8IW92 636 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 SDR9C7Q8NEX9 313 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 GJC3Q8NFK1 279 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 Q96MT0 163 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 RERGLQ9H628 205 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 CLN6Q9NWW5 311 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 KAAG1Q9UBP8 84 aa14.08□□□□□ -0.16
TOP3A-202ENST00000461127 PRSS37A4D1T9 235 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 PRR23D1E9PI22 279 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 PRR23D2P0DMB1 279 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 CTLA4P16410 223 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 CA6P23280 308 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 PRSS12P56730 875 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 ISL1P61371 349 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 CRMP1Q14194 572 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 GK2Q14410 553 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 MESTQ5EB52 335 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 OTPQ5XKR4 325 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 CCBE1Q6UXH8 406 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 PGAP1Q75T13 922 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 FAM90A1Q86YD7 464 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 SLC37A3Q8NCC5 494 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 LY6G5BQ8NDX9 201 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 BEND2Q8NDZ0 799 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 RHOXF1Q8NHV9 184 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 NMNAT3Q96T66 252 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 SSX3Q99909 188 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 ADAT1Q9BUB4 502 aaKnown RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 NPFFR1Q9GZQ6 430 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 FN3KQ9H479 309 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 C1orf123Q9NWV4 160 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 H2AFY2Q9P0M6 372 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-202ENST00000461127 DNAJB11Q9UBS4 358 aa14.07□□□□□ -0.16
TOP3A-202ENST00000461127 hCG_1807616A0A1W2PRN6 198 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 A6NLC8 198 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 SNTNA6NMZ2 147 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 GMDSO60547 372 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 KHDRBS3O75525 346 aaKnown RBP14.06□□□□□ -0.16
TOP3A-202ENST00000461127 PTBP3O95758 552 aaKnown RBP14.06□□□□□ -0.16
TOP3A-202ENST00000461127 ACSM1Q08AH1 577 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 LY6EQ16553 131 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 ZBTB37Q5TC79 503 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 MEDAGQ5VYS4 303 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 NCR3LG1Q68D85 454 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 PLBD1Q6P4A8 553 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 COLCA1Q6ZS62 124 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 SLC36A1Q7Z2H8 476 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 CPOQ8IVL8 374 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 CYB561A3Q8NBI2 242 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 OR51G2Q8NGK0 314 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 CNIH3Q8TBE1 160 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 DNAJC27Q9NZQ0 273 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 AASSQ9UDR5 926 aa14.06□□□□□ -0.16
TOP3A-202ENST00000461127 COA3Q9Y2R0 106 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-202ENST00000461127 FAM183AA6NL82 134 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 SLC16A7O60669 478 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 FCN3O75636 299 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 IGLL1P15814 213 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 CDKN2AP42771 156 aaKnown RBP14.05□□□□□ -0.16
TOP3A-202ENST00000461127 UBE2E1P51965 193 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 PRB3Q04118 309 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-202ENST00000461127 MZT1Q08AG7 82 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 KLRD1Q13241 179 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 MICBQ29980 383 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 MRPL21Q7Z2W9 205 aaKnown RBP14.05□□□□□ -0.16
TOP3A-202ENST00000461127 GID4Q8IVV7 300 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 RFKQ969G6 155 aa14.05□□□□□ -0.16
TOP3A-202ENST00000461127 OR6C68A6NDL8 312 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 ENTPD6O75354 484 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 LCATP04180 440 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 GRPP07492 148 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 CD28P10747 220 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 GABRB1P18505 474 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 FMO3P31513 532 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 RPS7P62081 194 aaKnown RBP14.04□□□□□ -0.16
TOP3A-202ENST00000461127 EFNB1P98172 346 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 POU4F2Q12837 409 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 ECH1Q13011 328 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 KLHL12Q53G59 568 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 SLC25A30Q5SVS4 291 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 C6orf141Q5SZD1 244 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 TEX36Q5VZQ5 186 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 GCSAMQ8N6F7 178 aa14.04□□□□□ -0.16
TOP3A-202ENST00000461127 OR9Q1Q8NGQ5 310 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms