RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 THEM4Q5T1C6 240 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 OLFML2AQ68BL7 652 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 PMS2CLQ68D20 193 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 CATSPERDQ86XM0 798 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 PNLDC1Q8NA58 520 aaKnown RBP13.64□□□□□ -0.23
LMNB1-203ENST00000460265 ROS1P08922 2347 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
LMNB1-203ENST00000460265 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 HLA-AP01891 365 aaKnown RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 PMP2P02689 132 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 PI3P19957 117 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 SNU13P55769 128 aaKnown RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 PLPPR5Q32ZL2 321 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 SLC36A1Q7Z2H8 476 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 TMED6Q8WW62 240 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 ADAT3Q96EY9 351 aaPredicted RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 OPA3Q9H6K4 179 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 H3BMH7 237 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 AP4M1O00189 453 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 NPIPB7O75200 414 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 LCATP04180 440 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 MUC1P15941 1255 aaPredicted RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 RAB5CP51148 216 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 ACOT7LQ6ZUV0 252 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 A6NLC8 198 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF814B7Z6K7 855 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 M0R036 132 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 CER1O95813 267 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 TMEM225BP0DP42 221 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 SLC35A1P78382 337 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 MPPED2Q15777 294 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 NFAM1Q8NET5 270 aaPredicted RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 OR51T1Q8NGJ9 327 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 RNF141Q8WVD5 230 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 ROBO4Q8WZ75 1007 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
LMNB1-203ENST00000460265 MRPS28Q9Y2Q9 187 aaKnown RBP13.63□□□□□ -0.23
LMNB1-203ENST00000460265 FAM230AA0A1W2PPH8 454 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 OR8U8P0C7N1 319 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 TMPPEQ6ZT21 453 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 FJX1Q86VR8 437 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 LIN37Q96GY3 246 aaPredicted RBP13.62□□□□□ -0.23
LMNB1-203ENST00000460265 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 hCG_1809904A0A1W2PP81 198 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 A0A1W2PR64 198 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 A0A1W2PRV1 198 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 CXorf65A6NEN9 183 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 MT-ND4LP03901 98 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 SFTPCP11686 197 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 GDF1P27539 372 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 TAS2R60P59551 318 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 GALNT16Q8N428 558 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 ALX4Q9H161 411 aaPredicted RBP13.62□□□□□ -0.23
LMNB1-203ENST00000460265 ARRDC1-AS1Q9H2J1 176 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 PILRBQ9UKJ0 227 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 FTCDNL1E5RQL4 147 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 KCNAB3O43448 404 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 SLC34A2O95436 690 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 C11orf87Q6NUJ2 197 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 LINC00696Q6ZRV3 163 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 SLC22A24Q8N4F4 322 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 OXGR1Q96P68 337 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
LMNB1-203ENST00000460265 A0A1W2PP11 408 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 OR5H15A6NDH6 313 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 TOX3O15405 576 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-203ENST00000460265 YIF1AO95070 293 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 CSTBP04080 98 aaKnown RBP13.61□□□□□ -0.23
LMNB1-203ENST00000460265 FOLR2P14207 255 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 GABRR1P24046 479 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ITGA3P26006 1051 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ADH6P28332 368 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 CD34P28906 385 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 AVPR2P30518 371 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF84P51523 738 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 TEX30Q5JUR7 227 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 DCAF12Q5T6F0 453 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 WDFY1Q8IWB7 410 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 UBALD2Q8IYN6 164 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 OR2M3Q8NG83 312 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ZNF385AQ96PM9 386 aaKnown RBP13.61□□□□□ -0.23
LMNB1-203ENST00000460265 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
LMNB1-203ENST00000460265 NRIP2Q9BQI9 281 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 RHOFQ9HBH0 211 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 BDP1A6H8Y1 2624 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 NBASA2RRP1 2371 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 TCAPO15273 167 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 SFTA3P0C7M3 94 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 IL13RA1P78552 427 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 PJVKQ0ZLH3 352 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 PRO1933Q9H354 126 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 OR2S2Q9NQN1 319 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 TNFSF18Q9UNG2 199 aa13.61□□□□□ -0.23
LMNB1-203ENST00000460265 TRBV5-7A0A0A0MS05 114 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms