RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TECTBQ96PL2 329 aa13.53□□□□□ -0.24
CD28-203ENST00000458610 ALG8Q9BVK2 526 aa13.53□□□□□ -0.24
CD28-203ENST00000458610 SSBP3Q9BWW4 388 aaPredicted RBP13.53□□□□□ -0.24
CD28-203ENST00000458610 ACOXLQ9NUZ1 547 aa13.53□□□□□ -0.24
CD28-203ENST00000458610 ERVK-18Q9QC07 812 aa13.53□□□□□ -0.24
CD28-203ENST00000458610 A8MXK9 166 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 ZNF732B4DXR9 585 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 IGHA1P01876 353 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 DCKP27707 260 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 THBS2P35442 1172 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 PSMB10P40306 273 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 GPM6AP51674 278 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 OR12D2P58182 307 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 FAM201AQ5SY85 155 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 WDR82Q6UXN9 313 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 WDR86Q86TI4 376 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 LHFPL3Q86UP9 236 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 C8orf59Q8N0T1 100 aaPredicted RBP13.52□□□□□ -0.25
CD28-203ENST00000458610 GCSAMQ8N6F7 178 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 OR52I1Q8NGK6 324 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 APH1BQ8WW43 257 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 C4orf36Q96KX1 117 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 FGF20Q9NP95 211 aaPredicted RBP13.52□□□□□ -0.25
CD28-203ENST00000458610 CHCHD3Q9NX63 227 aaKnown RBP13.52□□□□□ -0.25
CD28-203ENST00000458610 ERVK13-1Q9NX77 482 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 CLN8Q9UBY8 286 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 SLC7A11Q9UPY5 501 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.25
CD28-203ENST00000458610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.52□□□□□ -0.25
CD28-203ENST00000458610 C3orf80F5H4A9 247 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 H0YJX3 145 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 WBP4O75554 376 aaKnown RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 GATBO75879 557 aaKnown RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 ISG15P05161 165 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 PITPNBP48739 271 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 ODF4Q2M2E3 257 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 WDR38Q5JTN6 314 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 CEP78Q5JTW2 689 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 TEX36Q5VZQ5 186 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 CD276Q5ZPR3 534 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 TMEM42Q69YG0 159 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 SFRP4Q6FHJ7 346 aaPredicted RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 BTNL3Q6UXE8 466 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 TMPRSS11AQ6ZMR5 421 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 ZNF573Q86YE8 665 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 PRSS35Q8N3Z0 413 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 SCCPDHQ8NBX0 429 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 RPL3LQ92901 407 aaKnown RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 C12orf43Q96C57 262 aaKnown RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 JAM3Q9BX67 310 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 OR51I2Q9H344 312 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 PPP1R3EQ9H7J1 279 aa13.51□□□□□ -0.25
CD28-203ENST00000458610 NSD1Q96L73 2696 aaPredicted RBP13.51□□□□□ -0.25
CD28-203ENST00000458610 ZANQ9Y493 2812 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 MALRD1Q5VYJ5 2156 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 ANKRD61A6NGH8 418 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 CLIC3O95833 236 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 CCDC159P0C7I6 412 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 MYL12AP19105 171 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 ZFP36P26651 326 aaKnown RBP13.5□□□□□ -0.25
CD28-203ENST00000458610 CD80P33681 288 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 RBMXP38159 391 aaKnown RBP13.5□□□□□ -0.25
CD28-203ENST00000458610 CSNK2BP67870 215 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 C11orf91Q3C1V1 193 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 CNIH3Q8TBE1 160 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 HPSE2Q8WWQ2 592 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 PELI1Q96FA3 418 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 METTL17Q9H7H0 456 aaPredicted RBP13.5□□□□□ -0.25
CD28-203ENST00000458610 FRRS1LQ9P0K9 344 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 DNAJB11Q9UBS4 358 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 HHLA2Q9UM44 414 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 VPS13CQ709C8 3753 aa13.5□□□□□ -0.25
CD28-203ENST00000458610 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
CD28-203ENST00000458610 SRRM5B3KS81 715 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 ADAM20O43506 726 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
CD28-203ENST00000458610 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 ZNF676Q8N7Q3 588 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 C19orf18Q8NEA5 215 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 NANPQ8TBE9 248 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 PP6455Q8WZ26 134 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 TFAP2CQ92754 450 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 MRI1Q9BV20 369 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 COMMD4Q9H0A8 199 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 DNTTIP1Q9H147 329 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 GPR173Q9NS66 373 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 RASL12Q9NYN1 266 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 KAAG1Q9UBP8 84 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
CD28-203ENST00000458610 POLDIP2Q9Y2S7 368 aa13.49□□□□□ -0.25
CD28-203ENST00000458610 CAB39Q9Y376 341 aaPredicted RBP13.49□□□□□ -0.25
CD28-203ENST00000458610 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
CD28-203ENST00000458610 LOC107986453A0A1B0GWG9 222 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms