RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 LRRC29Q8WV35 223 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 HPS1Q92902 700 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 ERGIC1Q969X5 290 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 TMEM246Q9BRR3 403 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 RTL8AQ9BWD3 113 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 ANKRD60Q9BZ19 345 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 TLNRD1Q9H1K6 362 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 VCX3BQ9H321 246 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 ERVK-18Q9QC07 812 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 CAB39Q9Y376 341 aaPredicted RBP10.23□□□□□ -0.77
CNOT3-205ENST00000457463 PPIAL4AQ9Y536 164 aa10.23□□□□□ -0.77
CNOT3-205ENST00000457463 IRGMA1A4Y4 181 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 EFCAB10A6NFE3 127 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 LRRC30A6NM36 301 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 PTGES3LE9PB15 166 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 ISG15P05161 165 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 UBCP0CG48 685 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 IRF2P14316 349 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 ZFP36P26651 326 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 MDH2P40926 338 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CCR9P51686 369 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 GBX2P52951 348 aaPredicted RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CEACAM21Q3KPI0 293 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 ZNF404Q494X3 552 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 TMEM155Q4W5P6 130 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CLVS2Q5SYC1 327 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 ZBTB37Q5TC79 503 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 TMEM244Q5VVB8 128 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 RNF144BQ7Z419 303 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 KLHL36Q8N4N3 616 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 TRMT10AQ8TBZ6 339 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 NPRL2Q8WTW4 380 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 RGP1Q92546 391 aaPredicted RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 FGGYQ96C11 551 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CNBD2Q96M20 576 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 HIST1H2AAQ96QV6 131 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 WDR13Q9H1Z4 485 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 OR51I2Q9H344 312 aa10.22□□□□□ -0.77
CNOT3-205ENST00000457463 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CNOT2Q9NZN8 540 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 EXOSC1Q9Y3B2 195 aaKnown RBP10.22□□□□□ -0.77
CNOT3-205ENST00000457463 CUBNO60494 3623 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 IGKV1-27A0A075B6S5 117 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 IGKV1-9A0A0C4DH69 117 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 ANKRD61A6NGH8 418 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 A8MV72 311 aaPredicted RBP10.21□□□□□ -0.77
CNOT3-205ENST00000457463 F5H0A9 414 aaPredicted RBP10.21□□□□□ -0.77
CNOT3-205ENST00000457463 IFNL4K9M1U5 179 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 AKR7A2O43488 359 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 PLPP2O43688 288 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 SYNGR1O43759 233 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 TFF1P04155 84 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 CDK1P06493 297 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 MYL12AP19105 171 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 TGM4P49221 684 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 MZT1Q08AG7 82 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 CDK5R1Q15078 307 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 SNCBQ16143 134 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 IL17RELQ6ZVW7 336 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 CALHM1Q8IU99 346 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 BATF2Q8N1L9 274 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 STX19Q8N4C7 294 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 ZNF676Q8N7Q3 588 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 OR5A2Q8NGI9 324 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 OR13C5Q8NGS8 318 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 RPS4Y2Q8TD47 263 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 MRPL48Q96GC5 212 aaKnown RBP10.21□□□□□ -0.77
CNOT3-205ENST00000457463 ZNF488Q96MN9 340 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 BABAM2Q9NXR7 383 aa10.21□□□□□ -0.77
CNOT3-205ENST00000457463 MALRD1Q5VYJ5 2156 aa10.21□□□□□ -0.78
CNOT3-205ENST00000457463 TRBV2A0A0J9YWF9 115 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 A0A1B0GW55 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 FAM230AA0A1W2PPH8 454 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 PQLC2LA1A4F0 135 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 TMEM210A6NLX4 147 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DHRS7CA6NNS2 312 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 B4DSR2 109 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 LGALS8O00214 317 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 TNFRSF13BO14836 293 aaPredicted RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 PHF1O43189 567 aaPredicted RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 FCN3O75636 299 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 GYPAP02724 150 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 WNT2P09544 360 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L2P0CJ85 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L3P0CJ86 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L4P0CJ87 422 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L5P0CJ88 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L6P0CJ89 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L7P0CJ90 424 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 SONP18583 2426 aaKnown RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 AMY2BP19961 511 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 GNG3P63215 75 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 LCN2P80188 198 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 ASPHD2Q6ICH7 369 aa10.2□□□□□ -0.78
CNOT3-205ENST00000457463 RPL22L1Q6P5R6 122 aaKnown RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 HAGHLQ6PII5 290 aaPredicted RBP10.2□□□□□ -0.78
CNOT3-205ENST00000457463 DUX4L9Q6RFH8 374 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms