RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 CPNE2Q96FN4 548 aaPredicted RBP13.16□□□□□ -0.3
LDLR-202ENST00000455727 GPR87Q9BY21 358 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 PECRQ9BY49 303 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 CNTRLQ7Z7A1 2325 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 I3L521 148 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 OR2F2O95006 317 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 NMBP08949 121 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 AKR1C4P17516 323 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 GDF1P27539 372 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 RGS19P49795 217 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 PCBD1P61457 104 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 OR2F1Q13607 317 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 PDSS1Q5T2R2 415 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 NSUN5P2Q63ZY6 315 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 ZNF660Q6AZW8 331 aaPredicted RBP13.16□□□□□ -0.3
LDLR-202ENST00000455727 RGS7BPQ6MZT1 257 aaPredicted RBP13.16□□□□□ -0.3
LDLR-202ENST00000455727 ZNF774Q6NX45 483 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 GALNTL5Q7Z4T8 443 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 PEG10Q86TG7 708 aaKnown RBP13.16□□□□□ -0.3
LDLR-202ENST00000455727 LHFPL1Q86WI0 220 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 LOXL4Q96JB6 756 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 FOXB1Q99853 325 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 LRFN1Q9P244 771 aa13.16□□□□□ -0.3
LDLR-202ENST00000455727 PINLYPA6NC86 204 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 ZNF32P17041 273 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 AMY2BP19961 511 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 SERPINA2P20848 420 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 VAMP1P23763 118 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 NRN1LQ496H8 165 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 PPP1R1CQ8WVI7 109 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 WBP1Q96G27 269 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 REEP6Q96HR9 211 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 THOC3Q96J01 351 aaKnown RBP13.15□□□□□ -0.3
LDLR-202ENST00000455727 RGCCQ9H4X1 137 aa13.15□□□□□ -0.3
LDLR-202ENST00000455727 A0A0B4J2A0 478 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 LNP1A1A4G5 178 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 ZSCAN5BA6NJL1 495 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 SP9P0CG40 484 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 PRKACBP22694 351 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 FPR2P25090 351 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 ACKR3P25106 362 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 DMRTC1Q5HYR2 192 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 ALKAL2Q6UX46 152 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 OR5M9Q8NGP3 310 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 PIGTQ969N2 578 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 FAM173AQ9BQD7 235 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 RDH8Q9NYR8 311 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 SHPKQ9UHJ6 478 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 C21orf140B9A014 251 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 CCSO14618 274 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 B4GALT1P15291 398 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 AVPR2P30518 371 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 OR3A2P47893 321 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 SNU13P55769 128 aaKnown RBP13.14□□□□□ -0.31
LDLR-202ENST00000455727 MTCP1P56278 107 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 PSG4Q00888 419 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 CNN3Q15417 329 aaKnown RBP13.14□□□□□ -0.31
LDLR-202ENST00000455727 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 CDCP2Q5VXM1 449 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 ZNF100Q8IYN0 542 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 RBPMSQ93062 196 aaKnown RBP13.14□□□□□ -0.31
LDLR-202ENST00000455727 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
LDLR-202ENST00000455727 ALKBH3Q96Q83 286 aaPredicted RBP13.14□□□□□ -0.31
LDLR-202ENST00000455727 DHRS9Q9BPW9 319 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 ST6GALNAC5Q9BVH7 336 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 FAM117AQ9C073 453 aa13.14□□□□□ -0.31
LDLR-202ENST00000455727 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 LCATP04180 440 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 HPNP05981 417 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 M6PRP20645 277 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 UBA52P62987 128 aaKnown RBP13.13□□□□□ -0.31
LDLR-202ENST00000455727 HGFACQ04756 655 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 SPINK14Q6IE38 97 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 ASCL4Q6XD76 172 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 ACOT7LQ6ZUV0 252 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 OR5AP2Q8NGF4 316 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 OR10K1Q8NGX5 313 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 CASTOR1Q8WTX7 329 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 Q96M66 194 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 REG4Q9BYZ8 158 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 OR2H1Q9GZK4 316 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 GPR173Q9NS66 373 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 OSGIN2Q9Y236 505 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
LDLR-202ENST00000455727 NEURL1O76050 574 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 HTR5AP47898 357 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 NPY4RP50391 375 aa13.13□□□□□ -0.31
LDLR-202ENST00000455727 CYCSP99999 105 aaKnown RBP13.13□□□□□ -0.31
LDLR-202ENST00000455727 SURF2Q15527 256 aaPredicted RBP13.13□□□□□ -0.31
LDLR-202ENST00000455727 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms