RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SEH1LQ96EE3 360 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 SCARF2Q96GP6 870 aaPredicted RBP9.92□□□□□ -0.82
DDR1-240ENST00000454612 C12orf49Q9H741 205 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 CACNA1BQ00975 2339 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 FRYLO94915 3013 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 PCNX3Q9H6A9 2034 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 A0A1W2PR80 420 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 NXPH1P58417 271 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 ACTBL2Q562R1 376 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 OR5L1Q8NGL2 311 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 OR10D4PQ8NGN7 298 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 SOSTQ9BQB4 213 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 MFRPQ9BY79 579 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 KCNJ16Q9NPI9 418 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 PCDHB10Q9UN67 800 aa9.92□□□□□ -0.82
DDR1-240ENST00000454612 MUC22E2RYF6 1773 aaPredicted RBP9.92□□□□□ -0.82
DDR1-240ENST00000454612 PRR19A6NJB7 356 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 GIPP09681 153 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 SLC25A1P53007 311 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 HERV-K104P61576 105 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 OR2B11Q5JQS5 317 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 HIST1H2AAQ96QV6 131 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 DCAF16Q9NXF7 216 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 PLA2G3Q9NZ20 509 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 LILRA5A6NI73 299 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 RPS2P15880 293 aaKnown RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 ANKRD37Q7Z713 158 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 IFI44Q8TCB0 444 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 MYOTQ9UBF9 498 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 SMCO3A2RU48 225 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 ZNF705FA8MVS1 300 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 MED6O75586 246 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 SLC34A2O95436 690 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 ZNF705DP0CH99 300 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 ZNF705BP0CI00 300 aaPredicted RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 TPT1P13693 172 aaKnown RBP9.91□□□□□ -0.82
DDR1-240ENST00000454612 PLCXD3Q63HM9 321 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 AAED1Q7RTV5 226 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 SLC16A14Q7RTX9 510 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 TMEM217Q8N7C4 229 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 UBAC2Q8NBM4 344 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 SECTM1Q8WVN6 248 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 EDAQ92838 391 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 MCHR2Q969V1 340 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 REEP6Q96HR9 211 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 SLC5A7Q9GZV3 580 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 WNT16Q9UBV4 365 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 RAB22AQ9UL26 194 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 FAM96BQ9Y3D0 163 aa9.91□□□□□ -0.82
DDR1-240ENST00000454612 C7orf66A4D0T2 115 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 BLACEA4D250 179 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 CNR1P21554 472 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 CFHR1Q03591 330 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 HACD4Q5VWC8 232 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 ZNF561Q8N587 486 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 ZNF385AQ96PM9 386 aaKnown RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 SPSB2Q99619 263 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 SHARPINQ9H0F6 387 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 TUBAL3A6NHL2 446 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 HOXC4P09017 264 aaPredicted RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 EIF2S3P41091 472 aaKnown RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 ARF1P84077 181 aaKnown RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 IL10RAQ13651 578 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 GUCA2BQ16661 112 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 PCK2Q16822 640 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 LTC4SQ16873 150 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 ATPAF1Q5TC12 328 aaPredicted RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 HIST2H3AQ71DI3 136 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 SULF2Q8IWU5 870 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 PHYHIPQ92561 330 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 ADIPOR1Q96A54 375 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 OR10A2Q9H208 303 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDR1-240ENST00000454612 OPN4Q9UHM6 478 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 A0A087X0M5 115 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 A0A1B0GX30 115 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 J3QRE1 110 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 ST8SIA5O15466 376 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 APOBEC1P41238 236 aaKnown RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 HSD17B13Q7Z5P4 300 aaPredicted RBP9.9□□□□□ -0.82
DDR1-240ENST00000454612 MISPQ8IVT2 679 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 OR5AS1Q8N127 324 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 AGBL5Q8NDL9 886 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 OR1S2Q8NGQ3 325 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 PLPPR2Q96GM1 343 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 FN3KRPQ9HA64 309 aa9.9□□□□□ -0.82
DDR1-240ENST00000454612 A0A0D9SG52 128 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 PMS2P2O95744 297 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 NFYBP25208 207 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 FOLR3P41439 243 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 C3AR1Q16581 482 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 C4orf17Q53FE4 359 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 EMC4Q5J8M3 183 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 SPATA46Q5T0L3 261 aa9.89□□□□□ -0.83
DDR1-240ENST00000454612 ZNF626Q68DY1 528 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms