RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MBD3L4A6NDZ8 208 aaPredicted RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 MBD3L3A6NE82 208 aaPredicted RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 MBD3L5A6NJ08 208 aaPredicted RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 ZNF587BE7ETH6 402 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 UPK3AO75631 287 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 ABHD16AO95870 558 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 ADRA2CP18825 462 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 NTF4P34130 210 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 PRSS3P35030 304 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 SORDQ00796 357 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 STK11Q15831 433 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 C2orf68Q2NKX9 166 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 PHYHD1Q5SRE7 291 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 FDX2Q6P4F2 183 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 FAM214BQ7L5A3 538 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 DPY19L4Q7Z388 723 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 C9orf106Q8NAJ2 232 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 OR5M8Q8NGP6 311 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 MBD3L2Q8NHZ7 208 aaPredicted RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 GPX8Q8TED1 209 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 ALKBH3Q96Q83 286 aaPredicted RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 DMRTA2Q96SC8 542 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 CRLF2Q9HC73 371 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 GPR35Q9HC97 309 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 TMEM138Q9NPI0 162 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 MRPL22Q9NWU5 206 aaKnown RBP13.87□□□□□ -0.19
SNX17-204ENST00000453453 TNFSF18Q9UNG2 199 aa13.87□□□□□ -0.19
SNX17-204ENST00000453453 TMEM272A0A1B0GTI8 110 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 ZNF98A6NK75 572 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 CTAG2O75638 210 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 KDM4BO94953 1096 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 SPDEFO95238 335 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 GTF2F2P13984 249 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 MSR1P21757 451 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 EGR3Q06889 387 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 TSC22D1Q15714 1073 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 KCNMB1Q16558 191 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 SGCAQ16586 387 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 MEP1BQ16820 701 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 MICBQ29980 383 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 TEX30Q5JUR7 227 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 TSPO2Q5TGU0 170 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 DCAF12L2Q5VW00 463 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 SLC18B1Q6NT16 456 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 FAAP20Q6NZ36 180 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 ATRAIDQ6UW56 229 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 NUFIP2Q7Z417 695 aaKnown RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 ZNF546Q86UE3 836 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 GCNT2Q8N0V5 402 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 SVBPQ8N300 66 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 CNEP1R1Q8N9A8 125 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 OTOSQ8NHW6 89 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 ASB17Q8WXJ9 295 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 C11orf40Q8WZ69 217 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 WDR89Q96FK6 387 aaPredicted RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 TTTY10Q9BZA0 68 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 NELFAQ9H3P2 528 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 C12orf49Q9H741 205 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 TAS2R3Q9NYW6 316 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 PKD1L2Q7Z442 2459 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 MAGEB4O15481 346 aaPredicted RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 ATG12O94817 140 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 SIX6O95475 246 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 IL2RAP01589 272 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 CRHP06850 196 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 MPZP25189 248 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 OR3A2P47893 321 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 CLDN12P56749 244 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 EIF2B1Q14232 305 aaKnown RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 STEAP1BQ6NZ63 245 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 C17orf107Q6ZR85 190 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 FOXL2NBQ6ZUU3 175 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 BPIFCQ8NFQ6 507 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 OR2AJ1Q8NGZ0 328 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 LILRB1Q8NHL6 650 aaPredicted RBP13.86□□□□□ -0.19
SNX17-204ENST00000453453 SLC7A10Q9NS82 523 aa13.86□□□□□ -0.19
SNX17-204ENST00000453453 TMEM82A0PJX8 343 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 OR4C45A6NMZ5 311 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 SLC17A2O00624 439 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 MPZL1O95297 269 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 WNT11O96014 354 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 IGHV3-9P01782 118 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 CDAP32320 146 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 CAPZA1P52907 286 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 CASP6P55212 293 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 LSM6P62312 80 aaKnown RBP13.85□□□□□ -0.19
SNX17-204ENST00000453453 MRPS34P82930 218 aaKnown RBP13.85□□□□□ -0.19
SNX17-204ENST00000453453 CEACAM16Q2WEN9 425 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 C4orf46Q504U0 113 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 KCTD18Q6PI47 426 aaPredicted RBP13.85□□□□□ -0.19
SNX17-204ENST00000453453 ACOT7LQ6ZUV0 252 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 CNTNAP3BQ96NU0 1288 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 CNTNAP3Q9BZ76 1288 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 COMMD9Q9P000 198 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 ZNF835Q9Y2P0 537 aa13.85□□□□□ -0.19
SNX17-204ENST00000453453 FAM215AQ9Y5M1 114 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms