RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FOXJ3Q9UPW0 622 aa9.54□□□□□ -0.88
GARNL3-210ENST00000453030 SAMHD1Q9Y3Z3 626 aaKnown RBP9.54□□□□□ -0.88
GARNL3-210ENST00000453030 MPC1Q9Y5U8 109 aa9.54□□□□□ -0.88
GARNL3-210ENST00000453030 OR2AT4A6NND4 320 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 H0YAE9 185 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 H3BN98 237 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 M0R1W7 72 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 SNX3O60493 162 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 SELENOFO60613 162 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 RHBDL1O75783 438 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 PRB2P02812 416 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-210ENST00000453030 LYNP07948 512 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 GLRA1P23415 457 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 MAGEA2P43356 314 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 GPM6AP51674 278 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 ACSM1Q08AH1 577 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 BLMHQ13867 455 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 HERPUD1Q15011 391 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 ATPAF1Q5TC12 328 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-210ENST00000453030 C16orf89Q6UX73 402 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 SHFQ7M4L6 423 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
GARNL3-210ENST00000453030 TIGD4Q8IY51 512 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 ZDHHC23Q8IYP9 409 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 FAM185AQ8N0U4 392 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 OR51G2Q8NGK0 314 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 OR4C13Q8NGP0 309 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 PPP1R35Q8TAP8 253 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 FAM81AQ8TBF8 368 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 OR5P3Q8WZ94 311 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 MED30Q96HR3 178 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 RNF170Q96K19 258 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 LYZL4Q96KX0 146 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 SSX3Q99909 188 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 RGCCQ9H4X1 137 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 REEP1Q9H902 201 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 ABCB9Q9NP78 766 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 ARL8BQ9NVJ2 186 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 TAGLN3Q9UI15 199 aa9.53□□□□□ -0.88
GARNL3-210ENST00000453030 IGKV1D-17A0A075B6S4 117 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 GLCEO94923 617 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 DCTDP32321 178 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 EFNB2P52799 333 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 CAPZA1P52907 286 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 CAV3P56539 151 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 PSMA6P60900 246 aaKnown RBP9.52□□□□□ -0.89
GARNL3-210ENST00000453030 GABPB1Q06547 395 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-210ENST00000453030 MICAQ29983 383 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 DMRTC1Q5HYR2 192 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 CEP78Q5JTW2 689 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 OR2T5Q6IEZ7 315 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 HCP5Q6MZN7 132 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 ZNRF1Q8ND25 227 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 OR10G2Q8NGC3 310 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 OR8B12Q8NGG6 310 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 OR2T29Q8NH02 315 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 THEM6Q8WUY1 208 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 NIPSNAP1Q9BPW8 284 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 DGCR6LQ9BY27 220 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.52□□□□□ -0.89
GARNL3-210ENST00000453030 ACTR3BQ9P1U1 418 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 FBLN5Q9UBX5 448 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 KLHDC2Q9Y2U9 406 aa9.52□□□□□ -0.89
GARNL3-210ENST00000453030 TCRBV5S2A0A599 114 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 RRP9O43818 475 aaKnown RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 CST4P01036 141 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OPN1MWP04001 364 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 ACAA1P09110 424 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OPN1MW2P0DN77 364 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OPN1MW3P0DN78 364 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 VSIG10L2P0DP72 767 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 PSG2P11465 335 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 PAICSP22234 425 aaKnown RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 LRRC75BQ2VPJ9 315 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 PIGWQ7Z7B1 504 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 COMMD2Q86X83 199 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 LYG1Q8N1E2 194 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 PAPD5Q8NDF8 572 aaKnown RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OR5D13Q8NGL4 314 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OR2T6Q8NHC8 308 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 OTOSQ8NHW6 89 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 CLPTM1LQ96KA5 538 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 HIST1H2AAQ96QV6 131 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 NKX3-1Q99801 234 aaPredicted RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 C19orf12Q9NSK7 152 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 NDE1Q9NXR1 346 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 ZNF222Q9UK12 451 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 SF3B6Q9Y3B4 125 aaKnown RBP9.51□□□□□ -0.89
GARNL3-210ENST00000453030 LRP12Q9Y561 859 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 MAB21L2Q9Y586 359 aa9.51□□□□□ -0.89
GARNL3-210ENST00000453030 TRBV23-1A0A0A0MS06 115 aa9.5□□□□□ -0.89
GARNL3-210ENST00000453030 ZNF732B4DXR9 585 aa9.5□□□□□ -0.89
GARNL3-210ENST00000453030 PRR23D1E9PI22 279 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-210ENST00000453030 CHST1O43916 411 aa9.5□□□□□ -0.89
GARNL3-210ENST00000453030 PRR23D2P0DMB1 279 aaPredicted RBP9.5□□□□□ -0.89
GARNL3-210ENST00000453030 COX7A1P24310 79 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms