RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 DUX4L4P0CJ87 422 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L5P0CJ88 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L6P0CJ89 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L7P0CJ90 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DCTDP32321 178 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 RIDAP52758 137 aaKnown RBP10.65□□□□□ -0.71
CHD3-206ENST00000452447 ELF3P78545 371 aaPredicted RBP10.65□□□□□ -0.71
CHD3-206ENST00000452447 ATP6AP1Q15904 470 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 FAM76BQ5HYJ3 339 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 ATPAF1Q5TC12 328 aaPredicted RBP10.65□□□□□ -0.71
CHD3-206ENST00000452447 STUMQ69YW2 141 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4L9Q6RFH8 374 aaPredicted RBP10.65□□□□□ -0.71
CHD3-206ENST00000452447 Q6YL49 198 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 ASRGL1Q7L266 308 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 ZDHHC13Q8IUH4 622 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 CMTM4Q8IZR5 234 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 HPSE2Q8WWQ2 592 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 TMIGD2Q96BF3 282 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 TTTY10Q9BZA0 68 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 PBOV1Q9GZY1 135 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 WDR13Q9H1Z4 485 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 UNKLQ9H9P5 680 aaKnown RBP10.65□□□□□ -0.71
CHD3-206ENST00000452447 SNTG1Q9NSN8 517 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 FAM206AQ9NX38 181 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 DUX4Q9UBX2 424 aa10.65□□□□□ -0.71
CHD3-206ENST00000452447 CMYA5Q8N3K9 4069 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 A0A1B0GVI7 797 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 FAM181BA6NEQ2 426 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 H0YHG0 523 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 ATP6V1B1P15313 513 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 GLRA1P23415 457 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 FASP25445 335 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 ACTR3P61158 418 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 GNG3P63215 75 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 ROM1Q03395 351 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 RIPPLY1Q0D2K3 151 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 CEP78Q5JTW2 689 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
CHD3-206ENST00000452447 MEPCEQ7L2J0 689 aaKnown RBP10.64□□□□□ -0.71
CHD3-206ENST00000452447 PDZD9Q8IXQ8 264 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 TMEM86BQ8N661 226 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 TCEANCQ8N8B7 351 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 OR51E1Q8TCB6 317 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 H1FXQ92522 213 aaKnown RBP10.64□□□□□ -0.71
CHD3-206ENST00000452447 MED30Q96HR3 178 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 DMRTB1Q96MA1 342 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 OR8B4Q96RC9 309 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 GPR84Q9NQS5 396 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 ENOPH1Q9UHY7 261 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 GTF2A1LQ9UNN4 478 aa10.64□□□□□ -0.71
CHD3-206ENST00000452447 WNK1Q9H4A3 2382 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 MITFO75030 526 aaPredicted RBP10.63□□□□□ -0.71
CHD3-206ENST00000452447 MTRF1O75570 445 aaKnown RBP10.63□□□□□ -0.71
CHD3-206ENST00000452447 MELTFP08582 738 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 AMY2BP19961 511 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 OMGP23515 440 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 TGM4P49221 684 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 CXCR4P61073 352 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 CEACAM21Q3KPI0 293 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 C1orf146Q5VVC0 180 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 NXNL2Q5VZ03 156 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 ZNF322Q6U7Q0 402 aaPredicted RBP10.63□□□□□ -0.71
CHD3-206ENST00000452447 VMO1Q7Z5L0 202 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 BCDIN3DQ7Z5W3 292 aaKnown RBP10.63□□□□□ -0.71
CHD3-206ENST00000452447 LY6G5BQ8NDX9 201 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 OR5A2Q8NGI9 324 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 ZNF671Q8TAW3 534 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 TBC1D15Q8TC07 691 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 TAF15Q92804 592 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD3-206ENST00000452447 MNTQ99583 582 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 CHIAQ9BZP6 476 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
CHD3-206ENST00000452447 ENPP5Q9UJA9 477 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 COPS3Q9UNS2 423 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 PIGLQ9Y2B2 252 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 FAM96BQ9Y3D0 163 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 AP4S1Q9Y587 144 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 POMT1Q9Y6A1 747 aa10.63□□□□□ -0.71
CHD3-206ENST00000452447 OR5B21A6NL26 309 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 OR2AT4A6NND4 320 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 M0R129 80 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 FCGR1AP12314 374 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 MDKP21741 143 aaPredicted RBP10.62□□□□□ -0.71
CHD3-206ENST00000452447 GABRA2P47869 451 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 SLX4IPQ5VYV7 408 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 PLCXD3Q63HM9 321 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 KDM4DQ6B0I6 523 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 ZNF788Q6ZQV5 615 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 MOB3CQ70IA8 216 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 KRT74Q7RTS7 529 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 SLC35F2Q8IXU6 374 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 ANGPTL6Q8NI99 470 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 TMEM163Q8TC26 289 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 IL4I1Q96RQ9 567 aa10.62□□□□□ -0.71
CHD3-206ENST00000452447 DCTN5Q9BTE1 182 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms