RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CST4P01036 141 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 LHBP01229 141 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 TTRP02766 147 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 GLRA1P23415 457 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 CFPP27918 469 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 ATP6V1E1P36543 226 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 CFHR2P36980 270 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 GABRA2P47869 451 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 DLX1P56177 255 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 DEFB112Q30KQ8 113 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 ZIK1Q3SY52 487 aaPredicted RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 CD276Q5ZPR3 534 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 ASRGL1Q7L266 308 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 DOK3Q7L591 496 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 GALNT4Q8N4A0 578 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 PNLDC1Q8NA58 520 aaKnown RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 OR10H4Q8NGA5 316 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 NPRL2Q8WTW4 380 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 ZDHHC16Q969W1 377 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 DUS3LQ96G46 650 aaKnown RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 CENPNQ96H22 339 aaPredicted RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 C1orf147Q96MC9 270 aaPredicted RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 RNPEPL1Q9HAU8 725 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 ELL3Q9HB65 397 aaPredicted RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 ABCB9Q9NP78 766 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 CLN6Q9NWW5 311 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 NUFIP1Q9UHK0 495 aaKnown RBP8.02□□□□□ -1.13
USP54-207ENST00000451492 ENOPH1Q9UHY7 261 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 OR52A1Q9UKL2 312 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 SLC22A13Q9Y226 551 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 R4GMQ9 66 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
USP54-207ENST00000451492 A0A0U1RQV5 110 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 A0A1W2PRD5 423 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 A0A1W2PRF3 423 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 A0A1W2PRM7 423 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 TNFRSF13BO14836 293 aaPredicted RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 NDUFB3O43676 98 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 NDUFA2O43678 99 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 ZNF254O75437 659 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 DHRS3O75911 302 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 INMTO95050 263 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 PLATP00750 562 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 KRT8P05787 483 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 MUC1P15941 1255 aaPredicted RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 NDUFB7P17568 137 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 CPT2P23786 658 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 MTNR1AP48039 350 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 CDC42P60953 191 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 ROM1Q03395 351 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 RIPPLY1Q0D2K3 151 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 ZNF684Q5T5D7 378 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 STUMQ69YW2 141 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 HAGHLQ6PII5 290 aaPredicted RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 DEGS2Q6QHC5 323 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 SLC36A1Q7Z2H8 476 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 VMO1Q7Z5L0 202 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 C3orf56Q8N813 242 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 TRMT10AQ8TBZ6 339 aaKnown RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 ZNF488Q96MN9 340 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 WDFY2Q96P53 400 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 GAFA1Q96PS6 74 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 TBX15Q96SF7 602 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 RBM4BQ9BQ04 359 aaKnown RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 OSBPL10Q9BXB5 764 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 GABARAPL3Q9BY60 117 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 TLNRD1Q9H1K6 362 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 MOB1AQ9H8S9 216 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 PLEKHA1Q9HB21 404 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 SIRT7Q9NRC8 400 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 IMPAD1Q9NX62 359 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 HAO2Q9NYQ3 351 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 NLKQ9UBE8 527 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 MRM2Q9UI43 246 aaKnown RBP8.01□□□□□ -1.13
USP54-207ENST00000451492 ENPP5Q9UJA9 477 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 ORC6Q9Y5N6 252 aa8.01□□□□□ -1.13
USP54-207ENST00000451492 A0A1W2PQ09 198 aa8□□□□□ -1.13
USP54-207ENST00000451492 A0A1W2PQL4 384 aaPredicted RBP8□□□□□ -1.13
USP54-207ENST00000451492 TMEM89A2RUT3 159 aa8□□□□□ -1.13
USP54-207ENST00000451492 SRSF10O75494 262 aaKnown RBP8□□□□□ -1.13
USP54-207ENST00000451492 MTRF1O75570 445 aaKnown RBP8□□□□□ -1.13
USP54-207ENST00000451492 NRASP01111 189 aa8□□□□□ -1.13
USP54-207ENST00000451492 PPIAL4GP0DN37 164 aa8□□□□□ -1.13
USP54-207ENST00000451492 MMP9P14780 707 aa8□□□□□ -1.13
USP54-207ENST00000451492 OMGP23515 440 aa8□□□□□ -1.13
USP54-207ENST00000451492 PRTN3P24158 256 aa8□□□□□ -1.13
USP54-207ENST00000451492 HTR1FP30939 366 aa8□□□□□ -1.13
USP54-207ENST00000451492 HAAOP46952 286 aa8□□□□□ -1.13
USP54-207ENST00000451492 CEBPDP49716 269 aaPredicted RBP8□□□□□ -1.13
USP54-207ENST00000451492 CAPZA1P52907 286 aa8□□□□□ -1.13
USP54-207ENST00000451492 ACTR3P61158 418 aa8□□□□□ -1.13
USP54-207ENST00000451492 GNG3P63215 75 aa8□□□□□ -1.13
USP54-207ENST00000451492 KLRD1Q13241 179 aa8□□□□□ -1.13
USP54-207ENST00000451492 SLC9A3R2Q15599 337 aa8□□□□□ -1.13
USP54-207ENST00000451492 CEACAM21Q3KPI0 293 aa8□□□□□ -1.13
USP54-207ENST00000451492 TP53I3Q53FA7 332 aa8□□□□□ -1.13
USP54-207ENST00000451492 AWAT1Q58HT5 328 aa8□□□□□ -1.13
USP54-207ENST00000451492 LRRC10Q5BKY1 277 aa8□□□□□ -1.13
USP54-207ENST00000451492 TMEM185AQ8NFB2 350 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms