RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 CENPXA8MT69 81 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 A8MXE2 369 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 CHRM2P08172 466 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 PSMB1P20618 241 aaKnown RBP12.28□□□□□ -0.44
USP39-207ENST00000450066 PRSS3P35030 304 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 BCAP31P51572 246 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ATP1B3P54709 279 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 AP3S2P59780 193 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 MOGAT2Q3SYC2 334 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 SLC22A6Q4U2R8 563 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 C7orf50Q9BRJ6 194 aaKnown RBP12.28□□□□□ -0.44
USP39-207ENST00000450066 PAPOLGQ9BWT3 736 aaKnown RBP12.28□□□□□ -0.44
USP39-207ENST00000450066 C1QTNF6Q9BXI9 259 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 TMEM59Q9BXS4 323 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 LPAR5Q9H1C0 372 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
USP39-207ENST00000450066 SPTA1P02549 2419 aa12.27□□□□□ -0.44
USP39-207ENST00000450066 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 H7C417 338 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 PFDN1O60925 122 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 CRTAPO75718 401 aaPredicted RBP12.27□□□□□ -0.45
USP39-207ENST00000450066 MPIG6BO95866 241 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 GSTT2BP0CG30 244 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 ZNF35P13682 527 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 BMP5P22003 454 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 UCP2P55851 309 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 PRDX4Q13162 271 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 MTFP1Q9UDX5 166 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 GPR160Q9UJ42 338 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 MYO7BQ6PIF6 2116 aa12.27□□□□□ -0.45
USP39-207ENST00000450066 TMEM8BA6NDV4 472 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 SULT1C2O00338 296 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 RBBP9O75884 186 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 TMEM225BP0DP42 221 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 SLC6A1P30531 599 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 PLA2G5P39877 138 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 PPP1CBP62140 327 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 CEACAM21Q3KPI0 293 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 C1QTNF12Q5T7M4 302 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 UNQ6126/PRO20091Q6UXV3 157 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 MRGPRGQ86SM5 289 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 ZDHHC23Q8IYP9 409 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 S100PBPQ96BU1 408 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 URM1Q9BTM9 101 aaKnown RBP12.26□□□□□ -0.45
USP39-207ENST00000450066 BANF2Q9H503 90 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 SCPEP1Q9HB40 452 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 ZGRF1Q86YA3 2104 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 NBEAQ8NFP9 2946 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 A0A1W2PP11 408 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 ANKRD20A5PA0PJZ0 165 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 CECR9P0C854 216 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 SFTPCP11686 197 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 VEGFCP49767 419 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
USP39-207ENST00000450066 SSBP1Q04837 148 aaKnown RBP12.26□□□□□ -0.45
USP39-207ENST00000450066 SNTB2Q13425 540 aaKnown RBP12.26□□□□□ -0.45
USP39-207ENST00000450066 FAM89BQ8N5H3 189 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 CELF2-AS1Q8N7Q2 184 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 GPX8Q8TED1 209 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 AQP3Q92482 292 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 SEH1LQ96EE3 360 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 METTL9Q9H1A3 318 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 MMP28Q9H239 520 aa12.26□□□□□ -0.45
USP39-207ENST00000450066 PQLC2LA1A4F0 135 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 WIPF3A6NGB9 483 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 EEF1E1-BLOC1S5C9J1V9 151 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 LPLP06858 475 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 MGMTP16455 207 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 TUBG1P23258 451 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 BTCP35070 178 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 STEAP2Q8NFT2 490 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 OR56B1Q8NGI3 324 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 DEDD2Q8WXF8 326 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 NICN1Q9BSH3 213 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 OR2J1Q9GZK6 312 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 ELL3Q9HB65 397 aaPredicted RBP12.25□□□□□ -0.45
USP39-207ENST00000450066 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 TAS2R8Q9NYW2 309 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 CRIM1Q9NZV1 1036 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 NLKQ9UBE8 527 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 SH3BGRL2Q9UJC5 107 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 A0A0A6YYD4 124 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 IGHV1-18A0A0C4DH31 117 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 ZNF780AO75290 641 aaPredicted RBP12.25□□□□□ -0.45
USP39-207ENST00000450066 MELTFP08582 738 aa12.25□□□□□ -0.45
USP39-207ENST00000450066 RAC2P15153 192 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms